RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 BNIP3LO60238 219 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 SYNCRIPO60506 623 aaKnown RBP15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 GABRG2P18507 467 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 CLCN6P51797 869 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 DGKEP52429 567 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 COPAP53621 1224 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 IL10RBQ08334 325 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 STARD3Q14849 445 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 ANGPT1Q15389 498 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 HEATR6Q6AI08 1181 aaKnown RBP15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 ANO7Q6IWH7 933 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 CACUL1Q86Y37 369 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 STK40Q8N2I9 435 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 UBE2Q2Q8WVN8 375 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 HMGB4Q8WW32 186 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 OLFM3Q96PB7 478 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 TM6SF2Q9BZW4 377 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 MKRN2Q9H000 416 aaKnown RBP15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 POLMQ9NP87 494 aaPredicted RBP15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 EFR3BQ9Y2G0 817 aa15.77■□□□□ 0.12
RPUSD3-217ENST00000485705 TARSL2A2RTX5 802 aaKnown RBP15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 APBB3O95704 486 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 ATP1A1P05023 1023 aaKnown RBP15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 TGM2P21980 687 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 CXCR5P32302 372 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 CETN2P41208 172 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 GEMIN4P57678 1058 aaKnown RBP15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 SLC10A7Q0GE19 358 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 INO80DQ53TQ3 878 aaPredicted RBP15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 CHST14Q8NCH0 376 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 MDGA1Q8NFP4 955 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 OR2A12Q8NGT7 310 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 OR2T3Q8NH03 318 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 ZNF419Q96HQ0 510 aaPredicted RBP15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 MRGPRX1Q96LB2 322 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 WDR24Q96S15 920 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 FAM129BQ96TA1 746 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 LGMNQ99538 433 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 FAM118BQ9BPY3 351 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 CEP44Q9C0F1 390 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 LHX3Q9UBR4 397 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 JRKLQ9Y4A0 524 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 FANCMQ8IYD8 2048 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 SPAG17Q6Q759 2223 aa15.76■□□□□ 0.11
RPUSD3-217ENST00000485705 CXorf51AA0A1B0GTR3 108 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 RNF103O00237 685 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 MUSKO15146 869 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 NDUFV2P19404 249 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 MX2P20592 715 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 RGRP47804 291 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 FNTBP49356 437 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 GNG11P61952 73 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 LBRQ14739 615 aaKnown RBP15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 ATXN7L2Q5T6C5 722 aaPredicted RBP15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 SEL1L2Q5TEA6 688 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 CCDC181Q5TID7 509 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 DPY19L3Q6ZPD9 716 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 RASSF3Q86WH2 238 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 TMPRSS6Q8IU80 811 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 LRRC49Q8IUZ0 686 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 CAMKK1Q8N5S9 505 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 PCDH20Q8N6Y1 951 aaKnown RBP15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 CCNYQ8ND76 341 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 OR6K2Q8NGY2 324 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 P3H4Q92791 437 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 ISG20Q96AZ6 181 aaKnown RBP15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 HDAC11Q96DB2 347 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 EXOC2Q96KP1 924 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 TSGA13Q96PP4 275 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 CARD9Q9H257 536 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 CD93Q9NPY3 652 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 FBXO4Q9UKT5 387 aa15.75■□□□□ 0.11
RPUSD3-217ENST00000485705 APOC4-APOC2K7ER74 178 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 TJP3O95049 919 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 APOC2P02655 101 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 SP9P0CG40 484 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 CCNCP24863 283 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 GKP32189 559 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 NR2C2P49116 596 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 NUBP1P53384 320 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 RHOAP61586 193 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 RPS14P62263 151 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 OTUD4Q01804 1114 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 PPIDQ08752 370 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 KLF1Q13351 362 aaPredicted RBP15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 PDK1Q15118 436 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 HS1BP3Q53T59 392 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 CARD16Q5EG05 197 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 TMCO4Q5TGY1 634 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 KIAA1324Q6UXG2 1013 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 ADAT2Q7Z6V5 191 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 ZC3H18Q86VM9 953 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 MMAAQ8IVH4 418 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 CCDC13Q8IYE1 715 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 PGBD3Q8N328 593 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 TSEN2Q8NCE0 465 aaKnown RBP15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 PRSS33Q8NF86 280 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 ACTL9Q8TC94 416 aa15.74■□□□□ 0.11
RPUSD3-217ENST00000485705 CASKIN2Q8WXE0 1202 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms