RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 NCKAP1LP55160 1127 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 CASP6P55212 293 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 PEX3P56589 373 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 VAMP2P63027 116 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ALCAMQ13740 583 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 EFR3AQ14156 821 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 MEA1Q16626 185 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TCTN1Q2MV58 587 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 LEXMQ3ZCV2 418 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 FAM205BPQ63HN1 556 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TWF2Q6IBS0 349 aaKnown RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TMC5Q6UXY8 1006 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 LIPIQ6XZB0 460 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 CLEC17AQ6ZS10 378 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ENOSF1Q7L5Y1 443 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 MRPL10Q7Z7H8 261 aaKnown RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 GPBP1Q86WP2 473 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ZDHHC13Q8IUH4 622 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 YAF2Q8IY57 180 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ELOA2Q8IYF1 753 aaPredicted RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 HACE1Q8IYU2 909 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 DAW1Q8N136 415 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TMEM161BQ8NDZ6 487 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 OR7D4Q8NG98 312 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 SHKBP1Q8TBC3 707 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 LRRC15Q8TF66 581 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 RFFLQ8WZ73 363 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ZUFSPQ96AP4 578 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ZNF689Q96CS4 500 aaPredicted RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 WDR92Q96MX6 357 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 ALPK1Q96QP1 1244 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 PLIN2Q99541 437 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TREX2Q9BQ50 279 aaPredicted RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 REEP2Q9BRK0 252 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 MINDY3Q9H8M7 445 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TMEM8AQ9HCN3 771 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TLR9Q9NR96 1032 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 OLFML3Q9NRN5 406 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 KRT84Q9NSB2 600 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 NSMCE4AQ9NXX6 385 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 TMEM59LQ9UK28 342 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 RALYQ9UKM9 306 aaKnown RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 PIN4Q9Y237 131 aaKnown RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 CNTNAP2Q9UHC6 1331 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 FNDC1Q4ZHG4 1894 aaPredicted RBP5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 CEP250Q9BV73 2442 aa5.89□□□□□ -1.47
NHLRC3-205ENST00000485407 CITO14578 2027 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 PGPEP1LA6NFU8 196 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 MYMKA6NI61 221 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 NOTOA8MTQ0 251 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 KIAA1324LA8MWY0 1029 aaPredicted RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 TMEM233B4DJY2 109 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 RFXAPO00287 272 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 N4BP3O15049 544 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 INPPL1O15357 1258 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 CSDE1O75534 798 aaKnown RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 MED26O95402 600 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 MATN4O95460 622 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 TGFB1P01137 390 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 CYBBP04839 570 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 PRKCBP05771 671 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 RB1P06400 928 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 NCAM1P13591 858 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 IL9P15248 144 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 ARF4P18085 180 aaPredicted RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 IL1R2P27930 398 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 SYKP43405 635 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 GLRBP48167 497 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 COPAP53621 1224 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 CTXN1P60606 82 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 IL13RA1P78552 427 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 DEFB103AP81534 67 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 GTF2BQ00403 316 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 PRPF4BQ13523 1007 aaKnown RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 SKIDA1Q1XH10 827 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 DCAF4L1Q3SXM0 396 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 C19orf54Q5BKX5 351 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 KANK2Q63ZY3 851 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 SLC27A1Q6PCB7 646 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 PAQR3Q6TCH7 311 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 ZNF720Q7Z2F6 126 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 PROSER1Q86XN7 944 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 ECHDC2Q86YB7 292 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 CREBRFQ8IUR6 639 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 CCDC65Q8IXS2 484 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 CEP57L1Q8IYX8 460 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 SLC15A4Q8N697 577 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 OR56A3Q8NH54 315 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 PPP1R14CQ8TAE6 165 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 THAP4Q8WY91 577 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 MRPS27Q92552 414 aaKnown RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 DNAJC19Q96DA6 116 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 RMDN1Q96DB5 314 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 ZNF668Q96K58 619 aaPredicted RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 C7orf26Q96N11 449 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 TGS1Q96RS0 853 aaKnown RBP5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 YME1L1Q96TA2 773 aa5.88□□□□□ -1.47
NHLRC3-205ENST00000485407 ADPGKQ9BRR6 497 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms