RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PES1O00541 588 aaKnown RBP19.66■□□□□ 0.74
COL27A1-205ENST00000485397 ZNF821O75541 412 aaPredicted RBP19.66■□□□□ 0.74
COL27A1-205ENST00000485397 PCDH8O95206 1070 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 CLDN2P57739 230 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 ILKQ13418 452 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 ACAP1Q15027 740 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 SEL1L3Q68CR1 1132 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 ERN2Q76MJ5 926 aaKnown RBP19.66■□□□□ 0.74
COL27A1-205ENST00000485397 FAM131BQ86XD5 332 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 OR13H1Q8NG92 308 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 CPA5Q8WXQ8 436 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 CFAP57Q96MR6 1250 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 BBC3Q96PG8 261 aaPredicted RBP19.66■□□□□ 0.74
COL27A1-205ENST00000485397 NAA15Q9BXJ9 866 aaKnown RBP19.66■□□□□ 0.74
COL27A1-205ENST00000485397 CLSTN2Q9H4D0 955 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 KLHL11Q9NVR0 708 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 UCKL1Q9NWZ5 548 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 ZNF212Q9UDV6 495 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 IL36AQ9UHA7 158 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 TMEM59LQ9UK28 342 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 ACTL7AQ9Y615 435 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 AK5Q9Y6K8 562 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 WASF2Q9Y6W5 498 aa19.66■□□□□ 0.74
COL27A1-205ENST00000485397 ILVBLA1L0T0 632 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 TLX3O43711 291 aaPredicted RBP19.65■□□□□ 0.74
COL27A1-205ENST00000485397 LEFTY1O75610 366 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 ZMPSTE24O75844 475 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 MMEP08473 750 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 DGKAP23743 735 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 ACP1P24666 158 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 AKT2P31751 481 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 RECQLP46063 649 aaPredicted RBP19.65■□□□□ 0.74
COL27A1-205ENST00000485397 SEMG2Q02383 582 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 CCDC15Q0P6D6 951 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 BNIPLQ7Z465 357 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 HAPLN3Q96S86 360 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 CALN1Q9BXU9 219 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 HDAC8Q9BY41 377 aa19.65■□□□□ 0.74
COL27A1-205ENST00000485397 SAMSN1Q9NSI8 373 aaKnown RBP19.65■□□□□ 0.74
COL27A1-205ENST00000485397 ASXL3Q9C0F0 2248 aa19.64■□□□□ 0.74
COL27A1-205ENST00000485397 UCHL3P15374 230 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 HNRNPA2B1P22626 353 aaKnown RBP19.64■□□□□ 0.73
COL27A1-205ENST00000485397 ITPKBP27987 946 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 ERCC5P28715 1186 aaPredicted RBP19.64■□□□□ 0.73
COL27A1-205ENST00000485397 NOMO3P69849 1222 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 ARF5P84085 180 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 INSM1Q01101 510 aaPredicted RBP19.64■□□□□ 0.73
COL27A1-205ENST00000485397 ZNF211Q13398 564 aaPredicted RBP19.64■□□□□ 0.73
COL27A1-205ENST00000485397 RAB6CQ53S08 254 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 NAA35Q5VZE5 725 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 GCNT7Q6ZNI0 430 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 EMC1Q8N766 993 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 ZYG11BQ9C0D3 744 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 RAB6CQ9H0N0 254 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 ATP13A1Q9HD20 1204 aa19.64■□□□□ 0.73
COL27A1-205ENST00000485397 FASNP49327 2511 aaKnown RBP19.64■□□□□ 0.73
COL27A1-205ENST00000485397 ITPR1Q14643 2758 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 FFAR2O15552 330 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 LSM8O95777 96 aaKnown RBP19.63■□□□□ 0.73
COL27A1-205ENST00000485397 ABCG1P45844 678 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 SERPINH1P50454 418 aaKnown RBP19.63■□□□□ 0.73
COL27A1-205ENST00000485397 DNA2P51530 1060 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 ATP11AP98196 1134 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 GNA12Q03113 381 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 RTP5Q14D33 572 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 TMEM259Q4ZIN3 620 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 ACBD5Q5T8D3 534 aaPredicted RBP19.63■□□□□ 0.73
COL27A1-205ENST00000485397 RETSATQ6NUM9 610 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 ZNF783Q6ZMS7 281 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 PHLDB2Q86SQ0 1253 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 DRC7Q8IY82 874 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 SLC22A18ASQ8N1D0 253 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 EPS8L1Q8TE68 723 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 RFFLQ8WZ73 363 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 PPP1R16AQ96I34 528 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 STK33Q9BYT3 514 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 NRSN2Q9GZP1 204 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 METTL5Q9NRN9 209 aaKnown RBP19.63■□□□□ 0.73
COL27A1-205ENST00000485397 TMEM51Q9NW97 253 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 CLCA2Q9UQC9 943 aa19.63■□□□□ 0.73
COL27A1-205ENST00000485397 FCF1Q9Y324 198 aaKnown RBP19.63■□□□□ 0.73
COL27A1-205ENST00000485397 F8VZ95 297 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 PIAS2O75928 621 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 CD160O95971 181 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 GIMD1P0DJR0 217 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 ACVRL1P37023 503 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 NEK3P51956 506 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 DAB2P98082 770 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 SLC20A2Q08357 652 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 MAPK8IP2Q13387 824 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-205ENST00000485397 FGL2Q14314 439 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 ZNF542PQ5EBM4 170 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 CARD16Q5EG05 197 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 Q6ZSR6 202 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 TMC6Q7Z403 805 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 ABI3BPQ7Z7G0 1075 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 PCDH20Q8N6Y1 951 aaKnown RBP19.62■□□□□ 0.73
COL27A1-205ENST00000485397 MSANTD4Q8NCY6 345 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 OR4C6Q8NH72 309 aa19.62■□□□□ 0.73
COL27A1-205ENST00000485397 SLC20A1Q8WUM9 679 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms