RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 ARL2BPQ9Y2Y0 163 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 PCDHGA5Q9Y5G8 931 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 NUP205Q92621 2012 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 SPTBN2O15020 2390 aa11.02□□□□□ -0.65
DDX56-212ENST00000485367 A0A1W2PQF6 199 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 DCDC2BA2VCK2 349 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 MIF4GDA9UHW6 222 aaKnown RBP11.01□□□□□ -0.65
DDX56-212ENST00000485367 DDX3YO15523 660 aaKnown RBP11.01□□□□□ -0.65
DDX56-212ENST00000485367 UBOX5O94941 541 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 ZNF806P0C7X5 589 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 NCAM1P13591 858 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 P2RY2P41231 377 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 ACADSBP45954 432 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 DHPSP49366 369 aaPredicted RBP11.01□□□□□ -0.65
DDX56-212ENST00000485367 GEN1Q17RS7 908 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 MPPE1Q53F39 396 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 FAM133BQ5BKY9 247 aaKnown RBP11.01□□□□□ -0.65
DDX56-212ENST00000485367 ASRGL1Q7L266 308 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 FAM217AQ8IXS0 508 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 FRMD1Q8N878 549 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 RNF25Q96BH1 459 aaPredicted RBP11.01□□□□□ -0.65
DDX56-212ENST00000485367 ZNF570Q96NI8 536 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 VPS45Q9NRW7 570 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 CACNA2D2Q9NY47 1150 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 PCYOX1Q9UHG3 505 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 SLC27A6Q9Y2P4 619 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 RAD54BQ9Y620 910 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 GON4LQ3T8J9 2241 aa11.01□□□□□ -0.65
DDX56-212ENST00000485367 BCLAF3A2AJT9 711 aaKnown RBP11□□□□□ -0.65
DDX56-212ENST00000485367 A6NHS1 94 aa11□□□□□ -0.65
DDX56-212ENST00000485367 WASH3PC4AMC7 463 aa11□□□□□ -0.65
DDX56-212ENST00000485367 RASGRF2O14827 1237 aa11□□□□□ -0.65
DDX56-212ENST00000485367 AHCYL1O43865 530 aa11□□□□□ -0.65
DDX56-212ENST00000485367 DIAPH2O60879 1101 aa11□□□□□ -0.65
DDX56-212ENST00000485367 PHF2O75151 1096 aa11□□□□□ -0.65
DDX56-212ENST00000485367 SHBGP04278 402 aa11□□□□□ -0.65
DDX56-212ENST00000485367 FESP07332 822 aa11□□□□□ -0.65
DDX56-212ENST00000485367 CCNB1P14635 433 aa11□□□□□ -0.65
DDX56-212ENST00000485367 GABRG2P18507 467 aa11□□□□□ -0.65
DDX56-212ENST00000485367 MSH2P43246 934 aa11□□□□□ -0.65
DDX56-212ENST00000485367 TBX4P57082 545 aa11□□□□□ -0.65
DDX56-212ENST00000485367 SETDB1Q15047 1291 aa11□□□□□ -0.65
DDX56-212ENST00000485367 TCEAL1Q15170 157 aa11□□□□□ -0.65
DDX56-212ENST00000485367 PARP6Q2NL67 630 aa11□□□□□ -0.65
DDX56-212ENST00000485367 MAP7D1Q3KQU3 841 aa11□□□□□ -0.65
DDX56-212ENST00000485367 PLA2G2CQ5R387 149 aa11□□□□□ -0.65
DDX56-212ENST00000485367 ADGRF1Q5T601 910 aa11□□□□□ -0.65
DDX56-212ENST00000485367 PMS2CLQ68D20 193 aa11□□□□□ -0.65
DDX56-212ENST00000485367 KIAA1211LQ6NV74 962 aa11□□□□□ -0.65
DDX56-212ENST00000485367 ZDHHC24Q6UX98 284 aa11□□□□□ -0.65
DDX56-212ENST00000485367 TRMT10CQ7L0Y3 403 aaKnown RBP11□□□□□ -0.65
DDX56-212ENST00000485367 ANKS1BQ7Z6G8 1248 aa11□□□□□ -0.65
DDX56-212ENST00000485367 JAMLQ86YT9 394 aa11□□□□□ -0.65
DDX56-212ENST00000485367 SLC30A5Q8TAD4 765 aa11□□□□□ -0.65
DDX56-212ENST00000485367 STK32AQ8WU08 396 aa11□□□□□ -0.65
DDX56-212ENST00000485367 UCMAQ8WVF2 138 aa11□□□□□ -0.65
DDX56-212ENST00000485367 FAM149B1Q96BN6 582 aa11□□□□□ -0.65
DDX56-212ENST00000485367 TMA16Q96EY4 203 aaKnown RBP11□□□□□ -0.65
DDX56-212ENST00000485367 PIWIL1Q96J94 861 aaKnown RBP11□□□□□ -0.65
DDX56-212ENST00000485367 GABRG3Q99928 467 aa11□□□□□ -0.65
DDX56-212ENST00000485367 TRIM51Q9BSJ1 452 aa11□□□□□ -0.65
DDX56-212ENST00000485367 RTKNQ9BST9 563 aa11□□□□□ -0.65
DDX56-212ENST00000485367 SLC4A5Q9BY07 1137 aa11□□□□□ -0.65
DDX56-212ENST00000485367 SLC2A11Q9BYW1 496 aa11□□□□□ -0.65
DDX56-212ENST00000485367 ABCF3Q9NUQ8 709 aa11□□□□□ -0.65
DDX56-212ENST00000485367 IRAK4Q9NWZ3 460 aa11□□□□□ -0.65
DDX56-212ENST00000485367 CYTH4Q9UIA0 394 aa11□□□□□ -0.65
DDX56-212ENST00000485367 DNAJC12Q9UKB3 198 aa11□□□□□ -0.65
DDX56-212ENST00000485367 RPL26L1Q9UNX3 145 aaKnown RBP11□□□□□ -0.65
DDX56-212ENST00000485367 NAALADL1Q9UQQ1 740 aa11□□□□□ -0.65
DDX56-212ENST00000485367 STON1Q9Y6Q2 735 aa11□□□□□ -0.65
DDX56-212ENST00000485367 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11□□□□□ -0.65
DDX56-212ENST00000485367 E5RJQ4 531 aa11□□□□□ -0.65
DDX56-212ENST00000485367 GFRA2O00451 464 aa11□□□□□ -0.65
DDX56-212ENST00000485367 DDX3XO00571 662 aaKnown RBP eCLIP11□□□□□ -0.658e-10■□□□□ 8.1
DDX56-212ENST00000485367 SLC30A4O14863 429 aa11□□□□□ -0.65
DDX56-212ENST00000485367 LATS1O95835 1130 aa11□□□□□ -0.65
DDX56-212ENST00000485367 FYNP06241 537 aa11□□□□□ -0.65
DDX56-212ENST00000485367 STAT1P42224 750 aa11□□□□□ -0.65
DDX56-212ENST00000485367 RPL34P49207 117 aaKnown RBP11□□□□□ -0.65
DDX56-212ENST00000485367 SLC11A2P49281 568 aa11□□□□□ -0.65
DDX56-212ENST00000485367 SLC29A2Q14542 456 aa11□□□□□ -0.65
DDX56-212ENST00000485367 TBC1D25Q3MII6 688 aa11□□□□□ -0.65
DDX56-212ENST00000485367 NUGGCQ68CJ6 796 aa11□□□□□ -0.65
DDX56-212ENST00000485367 RNF43Q68DV7 783 aa11□□□□□ -0.65
DDX56-212ENST00000485367 TCEAL6Q6IPX3 200 aa11□□□□□ -0.65
DDX56-212ENST00000485367 RFWD3Q6PCD5 774 aa11□□□□□ -0.65
DDX56-212ENST00000485367 ARMCX6Q7L4S7 300 aa11□□□□□ -0.65
DDX56-212ENST00000485367 LPCAT2Q7L5N7 544 aa11□□□□□ -0.65
DDX56-212ENST00000485367 CYP2U1Q7Z449 544 aa11□□□□□ -0.65
DDX56-212ENST00000485367 PASD1Q8IV76 773 aa11□□□□□ -0.65
DDX56-212ENST00000485367 UNC45BQ8IWX7 931 aa11□□□□□ -0.65
DDX56-212ENST00000485367 TMEFF1Q8IYR6 380 aa11□□□□□ -0.65
DDX56-212ENST00000485367 ADAM32Q8TC27 787 aa11□□□□□ -0.65
DDX56-212ENST00000485367 DQX1Q8TE96 717 aaKnown RBP11□□□□□ -0.65
DDX56-212ENST00000485367 CTNNBL1Q8WYA6 563 aaPredicted RBP11□□□□□ -0.65
DDX56-212ENST00000485367 SHC3Q92529 594 aa11□□□□□ -0.65
DDX56-212ENST00000485367 TCEAL3Q969E4 200 aa11□□□□□ -0.65
DDX56-212ENST00000485367 SERPINB12Q96P63 405 aa11□□□□□ -0.65
DDX56-212ENST00000485367 CIPCQ9C0C6 399 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms