RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 PDK2Q15119 407 aa27.17■■□□□ 1.94
SMDT1-203ENST00000484235 FAM46CQ5VWP2 391 aa27.17■■□□□ 1.94
SMDT1-203ENST00000484235 FAM124AQ86V42 546 aa27.17■■□□□ 1.94
SMDT1-203ENST00000484235 TMEM139Q8IV31 216 aa27.17■■□□□ 1.94
SMDT1-203ENST00000484235 CASKIN2Q8WXE0 1202 aa27.17■■□□□ 1.94
SMDT1-203ENST00000484235 ZNF419Q96HQ0 510 aaPredicted RBP27.17■■□□□ 1.94
SMDT1-203ENST00000484235 CELF6Q96J87 481 aaKnown RBP27.17■■□□□ 1.94
SMDT1-203ENST00000484235 FBXL12Q9NXK8 326 aa27.17■■□□□ 1.94
SMDT1-203ENST00000484235 BCLAF3A2AJT9 711 aaKnown RBP27.16■■□□□ 1.94
SMDT1-203ENST00000484235 PTGER3P43115 390 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 PSMD8P48556 350 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 GSDMDP57764 484 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 INO80DQ53TQ3 878 aaPredicted RBP27.16■■□□□ 1.94
SMDT1-203ENST00000484235 MAP7D3Q8IWC1 876 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 PLPP6Q8IY26 295 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 DEFB119Q8N690 84 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 CADM4Q8NFZ8 388 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 GANCQ8TET4 914 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 OMDQ99983 421 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 GPR174Q9BXC1 333 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 TNKS2Q9H2K2 1166 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 PARD6AQ9NPB6 346 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 FCF1Q9Y324 198 aaKnown RBP27.16■■□□□ 1.94
SMDT1-203ENST00000484235 ACTL7AQ9Y615 435 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 TPRP12270 2363 aaKnown RBP27.16■■□□□ 1.94
SMDT1-203ENST00000484235 ABCA7Q8IZY2 2146 aa27.16■■□□□ 1.94
SMDT1-203ENST00000484235 CHRNA3P32297 505 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 GJC1P36383 396 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 PAPOLAP51003 745 aaKnown RBP27.15■■□□□ 1.94
SMDT1-203ENST00000484235 CREB5Q02930 508 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 SPEM2Q0P670 501 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 CARD16Q5EG05 197 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 TMCO3Q6UWJ1 677 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 LEKR1Q6ZMV7 388 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 ARHGAP12Q8IWW6 846 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 TMIEQ8NEW7 156 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 FOXJ1Q92949 421 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 BTBD1Q9H0C5 482 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 SGK2Q9HBY8 427 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 SARDHQ9UL12 918 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 TFR2Q9UP52 801 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 PLXND1Q9Y4D7 1925 aa27.15■■□□□ 1.94
SMDT1-203ENST00000484235 C1QTNF3-AMACRE9PGA6 284 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 RNASEH2AO75792 299 aaKnown RBP27.14■■□□□ 1.94
SMDT1-203ENST00000484235 CD48P09326 243 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 DNA2P51530 1060 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 ZNF33AQ06730 810 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 DPYSL3Q14195 570 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 LRRC38Q5VT99 294 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 LYSMD4Q5XG99 296 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 DPY19L3Q6ZPD9 716 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 NPWQ8N729 165 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 CALR3Q96L12 384 aaKnown RBP27.14■■□□□ 1.94
SMDT1-203ENST00000484235 CALN1Q9BXU9 219 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 PCED1AQ9H1Q7 454 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 FZD4Q9ULV1 537 aa27.14■■□□□ 1.94
SMDT1-203ENST00000484235 REXO2Q9Y3B8 237 aaKnown RBP27.14■■□□□ 1.94
SMDT1-203ENST00000484235 CHD5Q8TDI0 1954 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 SDK1Q7Z5N4 2213 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 A0A1W2PP55 124 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 PRAMEF11O60813 436 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 PRNPP04156 253 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 ACSL1P33121 698 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 MPLP40238 635 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 DPP6P42658 865 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 MMRN1Q13201 1228 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 CSRP2Q16527 193 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 PLA2G2CQ5R387 149 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 ZFYVE27Q5T4F4 411 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 ARMCX6Q7L4S7 300 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 CYP2U1Q7Z449 544 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 SLC41A1Q8IVJ1 513 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 HDDC3Q8N4P3 179 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 AADATQ8N5Z0 425 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 PIP4K2CQ8TBX8 421 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 ZNF670Q9BS34 389 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 NEUROG2Q9H2A3 272 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 SEMA4GQ9NTN9 838 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 ETNK2Q9NVF9 386 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 SPAG17Q6Q759 2223 aa27.13■■□□□ 1.93
SMDT1-203ENST00000484235 RCCD1A6NED2 376 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 PRR5-ARHGAP8B1AHC4 643 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 J3KR12 359 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 DFFAO00273 331 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 BUB1BO60566 1050 aaPredicted RBP27.12■■□□□ 1.93
SMDT1-203ENST00000484235 COMTP21964 271 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 ARHGAP8P85298 464 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 LMNB2Q03252 620 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 ANKRD20A8PQ5CZ79 823 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 SYCP2LQ5T4T6 812 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 SYT12Q8IV01 421 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 CHST14Q8NCH0 376 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 HSPA12BQ96MM6 686 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 HEPHQ9BQS7 1158 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 PDFQ9HBH1 243 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 VPS45Q9NRW7 570 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 HECAQ9UBI9 543 aaPredicted RBP27.12■■□□□ 1.93
SMDT1-203ENST00000484235 SERGEFQ9UGK8 458 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 IL36AQ9UHA7 158 aa27.12■■□□□ 1.93
SMDT1-203ENST00000484235 MFHAS1Q9Y4C4 1052 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms