RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GREM1O60565 184 aa26.69■■□□□ 1.86
SHOX2-204ENST00000483851 INHBAP08476 426 aa26.69■■□□□ 1.86
SHOX2-204ENST00000483851 DDX6P26196 483 aaKnown RBP eCLIP26.69■■□□□ 1.86
SHOX2-204ENST00000483851 NAB1Q13506 487 aa26.69■■□□□ 1.86
SHOX2-204ENST00000483851 SPANXN3Q5MJ09 141 aa26.69■■□□□ 1.86
SHOX2-204ENST00000483851 HS6ST3Q8IZP7 471 aa26.69■■□□□ 1.86
SHOX2-204ENST00000483851 ADAMTS19Q8TE59 1207 aa26.69■■□□□ 1.86
SHOX2-204ENST00000483851 SMPD4Q9NXE4 827 aa26.69■■□□□ 1.86
SHOX2-204ENST00000483851 IQANK1A0A1B0GTG1 560 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 HNRNPA1P09651 372 aaKnown RBP eCLIP26.68■■□□□ 1.86
SHOX2-204ENST00000483851 KRT15P19012 456 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 SLC18A1P54219 525 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 RPS24P62847 133 aaKnown RBP26.68■■□□□ 1.86
SHOX2-204ENST00000483851 HTR3DQ70Z44 454 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 ZNF354CQ86Y25 554 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 C10orf67Q8IYJ2 551 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 PABPC5Q96DU9 382 aaKnown RBP26.68■■□□□ 1.86
SHOX2-204ENST00000483851 IMP4Q96G21 291 aaKnown RBP26.68■■□□□ 1.86
SHOX2-204ENST00000483851 TBL1YQ9BQ87 522 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 ATXN3LQ9H3M9 355 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 PDFQ9HBH1 243 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 SSU72Q9NP77 194 aaKnown RBP26.68■■□□□ 1.86
SHOX2-204ENST00000483851 SYBUQ9NX95 663 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 TYW5A2RUC4 315 aaKnown RBP26.68■■□□□ 1.86
SHOX2-204ENST00000483851 GFRA2O00451 464 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 BRAFP15056 766 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 SLC10A7Q0GE19 358 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 EFTUD2Q15029 972 aaKnown RBP eCLIP26.68■■□□□ 1.86
SHOX2-204ENST00000483851 LGSNQ5TDP6 509 aa26.68■■□□□ 1.86
SHOX2-204ENST00000483851 HJURPQ8NCD3 748 aaPredicted RBP26.68■■□□□ 1.86
SHOX2-204ENST00000483851 CKMP06732 381 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 PTPN2P17706 415 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 ADRA1AP35348 466 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 ACVRL1P37023 503 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 CYP4F8P98187 520 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 CAMK1Q14012 370 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 RFTN1Q14699 578 aaPredicted RBP26.67■■□□□ 1.86
SHOX2-204ENST00000483851 LBRQ14739 615 aaKnown RBP26.67■■□□□ 1.86
SHOX2-204ENST00000483851 TMEM135Q86UB9 458 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 SRRM1Q8IYB3 904 aaKnown RBP26.67■■□□□ 1.86
SHOX2-204ENST00000483851 BBS5Q8N3I7 341 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 CDKL2Q92772 493 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 WBP2Q969T9 261 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 SEC16BQ96JE7 1060 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 TGS1Q96RS0 853 aaKnown RBP26.67■■□□□ 1.86
SHOX2-204ENST00000483851 CORO1BQ9BR76 489 aa26.67■■□□□ 1.86
SHOX2-204ENST00000483851 FAM237BA0A1B0GVD1 139 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 KDELR3O43731 214 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 USP1O94782 785 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 POU2F2P09086 479 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 CREB1P16220 341 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 CRYMQ14894 314 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 PRPF39Q86UA1 669 aaKnown RBP26.66■■□□□ 1.86
SHOX2-204ENST00000483851 CPXM2Q8N436 756 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 MAB21L3Q8N8X9 362 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 SPATA22Q8NHS9 363 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 GRM6O15303 877 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 USP12O75317 370 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 FAM155BO75949 473 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 RHOCP08134 193 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 HOXD9P28356 352 aaPredicted RBP26.66■■□□□ 1.86
SHOX2-204ENST00000483851 SLC22A17Q8WUG5 538 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 PTCD2Q8WV60 388 aaKnown RBP26.66■■□□□ 1.86
SHOX2-204ENST00000483851 ACE2Q9BYF1 805 aaPredicted RBP26.66■■□□□ 1.86
SHOX2-204ENST00000483851 ARNT2Q9HBZ2 717 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 NT5MQ9NPB1 228 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 MAN1C1Q9NR34 630 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 UBP1Q9NZI7 540 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 ZMYM5Q9UJ78 669 aa26.66■■□□□ 1.86
SHOX2-204ENST00000483851 SMG5Q9UPR3 1016 aaKnown RBP26.66■■□□□ 1.86
SHOX2-204ENST00000483851 CCL16O15467 120 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 MT-CYBP00156 380 aaPredicted RBP26.65■■□□□ 1.86
SHOX2-204ENST00000483851 MYL4P12829 197 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 ERVK-21P61565 698 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 ALG1LQ6GMV1 187 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 ELMSAN1Q6PJG2 1045 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 RANBP10Q6VN20 620 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 MZB1Q8WU39 189 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 TADA1Q96BN2 335 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 ALKBH8Q96BT7 664 aaKnown RBP26.65■■□□□ 1.86
SHOX2-204ENST00000483851 SMC6Q96SB8 1091 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 FSD1LQ9BXM9 530 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 TRABDQ9H4I3 376 aa26.65■■□□□ 1.86
SHOX2-204ENST00000483851 A0A1W2PRU2 124 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 TMEM120BA0PK00 339 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 PRPF4O43172 522 aaKnown RBP eCLIP26.64■■□□□ 1.86
SHOX2-204ENST00000483851 CLASP2O75122 1294 aaKnown RBP26.64■■□□□ 1.86
SHOX2-204ENST00000483851 SERPINB9P50453 376 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 CRADDP78560 199 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 SLC14A2Q15849 920 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 MPP7Q5T2T1 576 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 POTEHQ6S545 545 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 PIGWQ7Z7B1 504 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 CTAGE3PQ8IX95 158 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 PPM1NQ8N819 430 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 IPMKQ8NFU5 416 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 POLR1EQ9GZS1 481 aaKnown RBP26.64■■□□□ 1.86
SHOX2-204ENST00000483851 RASSF4Q9H2L5 321 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 SOX13Q9UN79 622 aa26.64■■□□□ 1.86
SHOX2-204ENST00000483851 ARHGAP26Q9UNA1 814 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms