RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 PPP6R3Q5H9R7 873 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-225ENST00000483506 KCNT1Q5JUK3 1230 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 WDR45BQ5MNZ6 344 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 SYCP2LQ5T4T6 812 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 SLC23A3Q6PIS1 610 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 POLNQ7Z5Q5 900 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 RABEPKQ7Z6M1 372 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 FAM124AQ86V42 546 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 CCDC170Q8IYT3 715 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 DEFB119Q8N690 84 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 TMIEQ8NEW7 156 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 CASKIN2Q8WXE0 1202 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 TSC1Q92574 1164 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 SMOC1Q9H4F8 434 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 OSGEPQ9NPF4 335 aa18.36■□□□□ 0.53
HDAC6-225ENST00000483506 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.36■□□□□ 0.53
HDAC6-225ENST00000483506 FARP1Q9Y4F1 1045 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-225ENST00000483506 A0A1W2PP55 124 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 C1QTNF3-AMACRE9PGA6 284 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 H3BRJ5 948 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 SLC7A4O43246 635 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 CDC25BP30305 580 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 CHRNA3P32297 505 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 LIMK1P53667 647 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 INO80DQ53TQ3 878 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-225ENST00000483506 DCAF12L1Q5VU92 463 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 RHOT2Q8IXI1 618 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 CEP76Q8TAP6 659 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 SLC35G2Q8TBE7 412 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 PIP4K2CQ8TBX8 421 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 RFFLQ8WZ73 363 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 NEUROG2Q9H2A3 272 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 C6orf106Q9H6K1 298 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-225ENST00000483506 RCOR3Q9P2K3 495 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-225ENST00000483506 FCF1Q9Y324 198 aaKnown RBP18.35■□□□□ 0.53
HDAC6-225ENST00000483506 ACTL7AQ9Y615 435 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 PCDH15Q96QU1 1955 aa18.35■□□□□ 0.53
HDAC6-225ENST00000483506 DNAH14Q0VDD8 3507 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 ATXN2Q99700 1313 aaKnown RBP18.34■□□□□ 0.53
HDAC6-225ENST00000483506 KHNYNO15037 678 aaKnown RBP18.34■□□□□ 0.53
HDAC6-225ENST00000483506 RNASEH2AO75792 299 aaKnown RBP18.34■□□□□ 0.53
HDAC6-225ENST00000483506 GSRP00390 522 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 PRNPP04156 253 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 ARL4AP40617 200 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 ARHGAP25P42331 645 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 ARSEP51690 589 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 HADHQ16836 314 aaKnown RBP18.34■□□□□ 0.53
HDAC6-225ENST00000483506 DUOXA1Q1HG43 343 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 CARD16Q5EG05 197 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 TCEAL6Q6IPX3 200 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 DPY19L3Q6ZPD9 716 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 ARHGAP12Q8IWW6 846 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 HDDC3Q8N4P3 179 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 LZTR1Q8N653 840 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 NPWQ8N729 165 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 C12orf50Q8NA57 414 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-225ENST00000483506 C1orf216Q8TAB5 229 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 NETO1Q8TDF5 533 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 HSPH1Q92598 858 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 TCEAL3Q969E4 200 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 CSPG4P5Q96PW8 444 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 OMDQ99983 421 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 TNKS2Q9H2K2 1166 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 PDFQ9HBH1 243 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 CAPN10Q9HC96 672 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 PCDH18Q9HCL0 1135 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 DLL3Q9NYJ7 618 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 SUSD2Q9UGT4 822 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-225ENST00000483506 WASF2Q9Y6W5 498 aa18.34■□□□□ 0.53
HDAC6-225ENST00000483506 LNP1A1A4G5 178 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 ARHGAP42A6NI28 874 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 MEI4A8MW99 385 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 PATE3B3GLJ2 98 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 DAPK3O43293 454 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 BUB1O43683 1085 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 SERPINF2P08697 491 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 SDHBP21912 280 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 RECQLP46063 649 aaPredicted RBP18.33■□□□□ 0.52
HDAC6-225ENST00000483506 METAP1P53582 386 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 ADPRHP54922 357 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 TRIM61Q5EBN2 209 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 AGBL4Q5VU57 503 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 CPNE8Q86YQ8 564 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 CHST14Q8NCH0 376 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 OR2T34Q8NGX1 318 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 GANCQ8TET4 914 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 VOPP1Q96AW1 172 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 SLC39A8Q9C0K1 460 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 KDM4CQ9H3R0 1056 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 RXFP3Q9NSD7 469 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 IL36AQ9UHA7 158 aa18.33■□□□□ 0.52
HDAC6-225ENST00000483506 TPX2Q9ULW0 747 aaKnown RBP18.33■□□□□ 0.52
HDAC6-225ENST00000483506 LRRC72A6NJI9 287 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 PLRG1O43660 514 aaKnown RBP18.32■□□□□ 0.52
HDAC6-225ENST00000483506 BNIP3LO60238 219 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 PRAMEF11O60813 436 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 TMCC1O94876 653 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 IGHV4-34P06331 123 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 IL4RP24394 825 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms