RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 PGDP52209 483 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 HK2P52789 917 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 LOXL3P58215 753 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 CCNA1P78396 465 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 CYP4F8P98187 520 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 CD83Q01151 205 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 MAP2K1Q02750 393 aaPredicted RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 MVKQ03426 396 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 GABPB1Q06547 395 aaPredicted RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 PIGFQ07326 219 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 ZBTB17Q13105 803 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 SMAD4Q13485 552 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 BMPR2Q13873 1038 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 FRG1Q14331 258 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 MXD4Q14582 209 aaPredicted RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 ZNF273Q14593 569 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 GPR162Q16538 588 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 WDR72Q3MJ13 1102 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 SLC39A12Q504Y0 691 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 TDRD12Q587J7 1177 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 CRB2Q5IJ48 1285 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 C10orf76Q5T2E6 689 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 CERCAMQ5T4B2 595 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 RIPPLY2Q5TAB7 128 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 SHEQ5VZ18 495 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 AFMIDQ63HM1 303 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 KRT39Q6A163 491 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 SLC25A24Q6NUK1 477 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 MSANTD2Q6P1R3 559 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 AFTPHQ6ULP2 937 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 TEPPQ6URK8 271 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 MFSD7Q6UXD7 560 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 GLDNQ6ZMI3 551 aaPredicted RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 PIK3AP1Q6ZUJ8 805 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 C11orf57Q6ZUT1 292 aaPredicted RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 HAUS6Q7Z4H7 955 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 DSG4Q86SJ6 1040 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 HACE1Q8IYU2 909 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 FAM181AQ8N9Y4 354 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 FBXO15Q8NCQ5 510 aaPredicted RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 RBM15BQ8NDT2 890 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 PIK3C3Q8NEB9 887 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 SHCBP1Q8NEM2 672 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 PPP2R3CQ969Q6 453 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 INTS4Q96HW7 963 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 LRIG1Q96JA1 1093 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 MYRFLQ96LU7 910 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 TBC1D32Q96NH3 1257 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 WRNIP1Q96S55 665 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 TMEM209Q96SK2 561 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 H2AFJQ9BTM1 129 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 MECRQ9BV79 373 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 PLVAPQ9BX97 442 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 NPLQ9BXD5 320 aaPredicted RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 EPHX3Q9H6B9 360 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 TMEM206Q9H813 350 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 CD93Q9NPY3 652 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 PPANQ9NQ55 473 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 FBXO34Q9NWN3 711 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 ZMAT5Q9UDW3 170 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 HAO1Q9UJM8 370 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 TDRKHQ9Y2W6 561 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 JRKLQ9Y4A0 524 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 RAD54BQ9Y620 910 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 NFS1Q9Y697 457 aa5.27□□□□□ -1.57
R3HDM1-216ENST00000483065 TTC21BQ7Z4L5 1316 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 CTAGE5O15320 804 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 MAGEB3O15480 346 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 SRGAP3O43295 1099 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 MITFO75030 526 aaPredicted RBP5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 ZC3H11AO75152 810 aaKnown RBP eCLIP5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 SLC25A12O75746 678 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 UROSP10746 265 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 HSPA5P11021 654 aaKnown RBP5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 PDGFRAP16234 1089 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 HOXB4P17483 251 aaPredicted RBP5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 HK1P19367 917 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 FPR1P21462 350 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 EPHA3P29320 983 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 FMO4P31512 558 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 PXNP49023 591 aaPredicted RBP5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 CAMPP49913 170 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 GATMP50440 423 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 RPS6KA3P51812 740 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 ST8SIA6P61647 398 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 IL13RA1P78552 427 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 RUNX1T1Q06455 604 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 ABHD18Q0P651 414 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 BNIP3Q12983 259 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 IKQ13123 557 aaPredicted RBP5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 GRAPQ13588 217 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 CUL2Q13617 745 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 CCNIQ14094 377 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 IL11RAQ14626 422 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 MAJINQ3KP22 176 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 HS1BP3Q53T59 392 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 ATAD3BQ5T9A4 648 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 ANKRD40Q6AI12 368 aa5.26□□□□□ -1.57
R3HDM1-216ENST00000483065 CENPPQ6IPU0 288 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms