RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 TNFSF9P41273 254 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 CCR10P46092 362 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 GRIA4P48058 902 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 IRF9Q00978 393 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 PRKCEQ02156 737 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 GALNT2Q10471 571 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 NME3Q13232 169 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 PPIL2Q13356 520 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 ORC1Q13415 861 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 EMC2Q15006 297 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 DUOXA2Q1HG44 320 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 ARL13AQ5H913 290 aaPredicted RBP11.21□□□□□ -0.62
RPGR-208ENST00000482855 GLRA4Q5JXX5 417 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 GALNT18Q6P9A2 607 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 CAMK1DQ8IU85 385 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 MFSD2AQ8NA29 543 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 KCNN1Q92952 543 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 ISL2Q96A47 359 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 CERS2Q96G23 380 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 RBBP8Q99708 897 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 UPF3AQ9H1J1 476 aaKnown RBP11.21□□□□□ -0.62
RPGR-208ENST00000482855 SUN2Q9UH99 717 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 PGAP2Q9UHJ9 254 aa11.21□□□□□ -0.62
RPGR-208ENST00000482855 C2CD4BA6NLJ0 364 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 ZNF839A8K0R7 811 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 AQP9O43315 295 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 BCL10O95999 233 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 POLBP06746 335 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 RAP1GAPP47736 663 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 SP4Q02446 784 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 NSUN2Q08J23 767 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPGR-208ENST00000482855 MERTKQ12866 999 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 STX5Q13190 355 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 KCTD8Q6ZWB6 473 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 CPXCR1Q8N123 301 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 CBR4Q8N4T8 237 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 PCYOX1LQ8NBM8 494 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 STON2Q8WXE9 905 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 ARNTL2Q8WYA1 636 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 APBA2Q99767 749 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 MRIQ9BWK5 157 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 NGRNQ9NPE2 291 aaKnown RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 HESX1Q9UBX0 185 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 ZDHHC2Q9UIJ5 367 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 M0QYV0 167 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 TRIM24O15164 1050 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 GRAP2O75791 330 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 JUNP05412 331 aaKnown RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 PSAPP07602 524 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 HSPA1AP0DMV8 641 aaKnown RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 HSPA1BP0DMV9 641 aaKnown RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 TFE3P19532 575 aaPredicted RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 IREB2P48200 963 aaKnown RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 LIMK2P53671 638 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 TFAMQ00059 246 aaKnown RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 GBE1Q04446 702 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 NEDD8Q15843 81 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 KIZQ2M2Z5 673 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 LIPMQ5VYY2 423 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 LRRC8EQ6NSJ5 796 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 TRNP1Q6NT89 227 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 KCNT2Q6UVM3 1135 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 CES3Q6UWW8 571 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 ERMP1Q7Z2K6 904 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 STRA8Q7Z7C7 330 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 ZC3H7AQ8IWR0 971 aaKnown RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 ZNF670Q9BS34 389 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 UNKQ9C0B0 810 aaKnown RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 TDRD3Q9H7E2 651 aaKnown RBP11.2□□□□□ -0.62
RPGR-208ENST00000482855 SPAG4Q9NPE6 437 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 RIC8BQ9NVN3 520 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 DAPK2Q9UIK4 370 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 SIP14410 1827 aa11.2□□□□□ -0.62
RPGR-208ENST00000482855 SCN9AQ15858 1988 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 PRORSD1PA6NEY8 169 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 TPD52L2O43399 206 aaKnown RBP11.19□□□□□ -0.62
RPGR-208ENST00000482855 MICAL2O94851 1124 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 APOA4P06727 396 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 CYP2F1P24903 491 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 ETFBP38117 255 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 NAMPTP43490 491 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 C1QTNF8P60827 252 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 ZBTB17Q13105 803 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 DLG2Q15700 870 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 CA9Q16790 459 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 OR6B2Q6IFH4 312 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 FSTL4Q6MZW2 842 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 CLEC14AQ86T13 490 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 IGFN1Q86VF2 1251 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 CYGBQ8WWM9 190 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.622e-6■■■■□ 23.4
RPGR-208ENST00000482855 RMDN3Q96TC7 470 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 SNRNP25Q9BV90 132 aaKnown RBP11.19□□□□□ -0.62
RPGR-208ENST00000482855 ACE2Q9BYF1 805 aaPredicted RBP11.19□□□□□ -0.62
RPGR-208ENST00000482855 CAB39LQ9H9S4 337 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 SYBUQ9NX95 663 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 CROTQ9UKG9 612 aa11.19□□□□□ -0.62
RPGR-208ENST00000482855 DYNC1LI2O43237 492 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms