RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 SERPINB6P35237 376 aa21.31■■□□□ 1
SEC13-217ENST00000482647 PSMD8P48556 350 aa21.31■■□□□ 1
SEC13-217ENST00000482647 KIF5AQ12840 1032 aa21.31■■□□□ 1
SEC13-217ENST00000482647 MMRN1Q13201 1228 aa21.31■■□□□ 1
SEC13-217ENST00000482647 ODF2Q5BJF6 829 aa21.31■■□□□ 1
SEC13-217ENST00000482647 ANKRD20A8PQ5CZ79 823 aa21.31■■□□□ 1
SEC13-217ENST00000482647 CARD16Q5EG05 197 aa21.31■■□□□ 1
SEC13-217ENST00000482647 C11orf63Q6NUN7 778 aa21.31■■□□□ 1
SEC13-217ENST00000482647 USP30Q70CQ3 517 aa21.31■■□□□ 1
SEC13-217ENST00000482647 ALYREFQ86V81 257 aaKnown RBP21.31■■□□□ 1
SEC13-217ENST00000482647 ARHGAP12Q8IWW6 846 aa21.31■■□□□ 1
SEC13-217ENST00000482647 TMEFF1Q8IYR6 380 aa21.31■■□□□ 1
SEC13-217ENST00000482647 NPWQ8N729 165 aa21.31■■□□□ 1
SEC13-217ENST00000482647 HINFPQ9BQA5 517 aa21.31■■□□□ 1
SEC13-217ENST00000482647 DESI2Q9BSY9 194 aa21.31■■□□□ 1
SEC13-217ENST00000482647 LACRTQ9GZZ8 138 aa21.31■■□□□ 1
SEC13-217ENST00000482647 CD93Q9NPY3 652 aa21.31■■□□□ 1
SEC13-217ENST00000482647 ETNK2Q9NVF9 386 aa21.31■■□□□ 1
SEC13-217ENST00000482647 FBXL12Q9NXK8 326 aa21.31■■□□□ 1
SEC13-217ENST00000482647 DDX56Q9NY93 547 aaKnown RBP21.31■■□□□ 1
SEC13-217ENST00000482647 WSB2Q9NYS7 404 aaPredicted RBP21.31■■□□□ 1
SEC13-217ENST00000482647 HYOU1Q9Y4L1 999 aa21.31■■□□□ 1
SEC13-217ENST00000482647 ACTL7AQ9Y615 435 aa21.31■■□□□ 1
SEC13-217ENST00000482647 DUSP10Q9Y6W6 482 aa21.31■■□□□ 1
SEC13-217ENST00000482647 C1QTNF3-AMACRE9PGA6 284 aa21.3■■□□□ 1
SEC13-217ENST00000482647 MID1O15344 667 aa21.3■■□□□ 1
SEC13-217ENST00000482647 PRAMEF11O60813 436 aa21.3■■□□□ 1
SEC13-217ENST00000482647 TNNT1P13805 278 aa21.3■■□□□ 1
SEC13-217ENST00000482647 KDELR1P24390 212 aa21.3■■□□□ 1
SEC13-217ENST00000482647 CHRNA3P32297 505 aa21.3■■□□□ 1
SEC13-217ENST00000482647 DAAM2Q86T65 1068 aa21.3■■□□□ 1
SEC13-217ENST00000482647 FAM124AQ86V42 546 aa21.3■■□□□ 1
SEC13-217ENST00000482647 PLPP6Q8IY26 295 aa21.3■■□□□ 1
SEC13-217ENST00000482647 TMIEQ8NEW7 156 aa21.3■■□□□ 1
SEC13-217ENST00000482647 TPCN2Q8NHX9 752 aa21.3■■□□□ 1
SEC13-217ENST00000482647 RAPGEF5Q92565 580 aa21.3■■□□□ 1
SEC13-217ENST00000482647 OMDQ99983 421 aa21.3■■□□□ 1
SEC13-217ENST00000482647 UBA2Q9UBT2 640 aaPredicted RBP21.3■■□□□ 1
SEC13-217ENST00000482647 SALL4Q9UJQ4 1053 aa21.3■■□□□ 1
SEC13-217ENST00000482647 RIF1Q5UIP0 2472 aaKnown RBP21.29■■□□□ 1
SEC13-217ENST00000482647 LRRD1A4D1F6 860 aa21.29■■□□□ 1
SEC13-217ENST00000482647 J3KR12 359 aa21.29■■□□□ 1
SEC13-217ENST00000482647 ARHGAP6O43182 974 aa21.29■■□□□ 1
SEC13-217ENST00000482647 TMCC1O94876 653 aa21.29■■□□□ 1
SEC13-217ENST00000482647 PRNPP04156 253 aa21.29■■□□□ 1
SEC13-217ENST00000482647 DHPSP49366 369 aaPredicted RBP21.29■■□□□ 1
SEC13-217ENST00000482647 DPY19L3Q6ZPD9 716 aa21.29■■□□□ 1
SEC13-217ENST00000482647 LRRC8AQ8IWT6 810 aa21.29■■□□□ 1
SEC13-217ENST00000482647 PCDH19Q8TAB3 1148 aa21.29■■□□□ 1
SEC13-217ENST00000482647 FAF2Q96CS3 445 aa21.29■■□□□ 1
SEC13-217ENST00000482647 BTBD1Q9H0C5 482 aa21.29■■□□□ 1
SEC13-217ENST00000482647 SGK2Q9HBY8 427 aa21.29■■□□□ 1
SEC13-217ENST00000482647 HECAQ9UBI9 543 aaPredicted RBP21.29■■□□□ 1
SEC13-217ENST00000482647 MFHAS1Q9Y4C4 1052 aa21.29■■□□□ 1
SEC13-217ENST00000482647 PCDHGA5Q9Y5G8 931 aa21.29■■□□□ 1
SEC13-217ENST00000482647 A0A1W2PP55 124 aa21.28■■□□□ 1
SEC13-217ENST00000482647 ZNF487B1APH4 448 aa21.28■■□□□ 1
SEC13-217ENST00000482647 PSTPIP1O43586 416 aa21.28■■□□□ 1
SEC13-217ENST00000482647 NRDCO43847 1150 aa21.28■■□□□ 1
SEC13-217ENST00000482647 RNASEH2AO75792 299 aaKnown RBP21.28■■□□□ 1
SEC13-217ENST00000482647 EPN2O95208 641 aa21.28■■□□□ 1
SEC13-217ENST00000482647 GSRP00390 522 aa21.28■■□□□ 1
SEC13-217ENST00000482647 SNRPD1P62314 119 aaKnown RBP21.28■■□□□ 1
SEC13-217ENST00000482647 IFI16Q16666 785 aaKnown RBP21.28■■□□□ 1
SEC13-217ENST00000482647 VSIG1Q86XK7 387 aa21.28■■□□□ 1
SEC13-217ENST00000482647 RYBPQ8N488 228 aaPredicted RBP21.28■■□□□ 1
SEC13-217ENST00000482647 HDDC3Q8N4P3 179 aa21.28■■□□□ 1
SEC13-217ENST00000482647 NETO2Q8NC67 525 aa21.28■■□□□ 1
SEC13-217ENST00000482647 CHST14Q8NCH0 376 aa21.28■■□□□ 1
SEC13-217ENST00000482647 CADM4Q8NFZ8 388 aa21.28■■□□□ 1
SEC13-217ENST00000482647 PIP4K2CQ8TBX8 421 aa21.28■■□□□ 1
SEC13-217ENST00000482647 ANP32BQ92688 251 aaKnown RBP21.28■■□□□ 1
SEC13-217ENST00000482647 HEPHQ9BQS7 1158 aa21.28■■□□□ 1
SEC13-217ENST00000482647 GPR174Q9BXC1 333 aa21.28■■□□□ 1
SEC13-217ENST00000482647 MAK16Q9BXY0 300 aaKnown RBP21.28■■□□□ 1
SEC13-217ENST00000482647 GOLPH3Q9H4A6 298 aa21.28■■□□□ 1
SEC13-217ENST00000482647 SP110Q9HB58 689 aa21.28■■□□□ 1
SEC13-217ENST00000482647 PDFQ9HBH1 243 aa21.28■■□□□ 1
SEC13-217ENST00000482647 IL36AQ9UHA7 158 aa21.28■■□□□ 1
SEC13-217ENST00000482647 IPO11Q9UI26 975 aaKnown RBP21.28■■□□□ 1
SEC13-217ENST00000482647 SARDHQ9UL12 918 aa21.28■■□□□ 1
SEC13-217ENST00000482647 FZD4Q9ULV1 537 aa21.28■■□□□ 1
SEC13-217ENST00000482647 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.28■■□□□ 1
SEC13-217ENST00000482647 KRT1P04264 644 aa21.27■■□□□ 1
SEC13-217ENST00000482647 PTGER3P43115 390 aa21.27■■□□□ 1
SEC13-217ENST00000482647 CCNHP51946 323 aaPredicted RBP21.27■■□□□ 1
SEC13-217ENST00000482647 RHOAP61586 193 aa21.27■■□□□ 1
SEC13-217ENST00000482647 CREB5Q02930 508 aa21.27■■□□□ 1
SEC13-217ENST00000482647 IL10RBQ08334 325 aa21.27■■□□□ 1
SEC13-217ENST00000482647 PAFAH1B3Q15102 231 aaKnown RBP21.27■■□□□ 1
SEC13-217ENST00000482647 ARSIQ5FYB1 569 aa21.27■■□□□ 1
SEC13-217ENST00000482647 LYSMD4Q5XG99 296 aa21.27■■□□□ 1
SEC13-217ENST00000482647 LRRC49Q8IUZ0 686 aa21.27■■□□□ 1
SEC13-217ENST00000482647 AADATQ8N5Z0 425 aa21.27■■□□□ 1
SEC13-217ENST00000482647 DEFB119Q8N690 84 aa21.27■■□□□ 1
SEC13-217ENST00000482647 OR2AP1Q8NGE2 309 aa21.27■■□□□ 1
SEC13-217ENST00000482647 KIAA1524Q8TCG1 905 aa21.27■■□□□ 1
SEC13-217ENST00000482647 FOXJ1Q92949 421 aa21.27■■□□□ 1
SEC13-217ENST00000482647 ZNF419Q96HQ0 510 aaPredicted RBP21.27■■□□□ 1
SEC13-217ENST00000482647 RNF157Q96PX1 679 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms