RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 MBTD1Q05BQ5 628 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 FKBP1CQ5VVH2 108 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 C4orf22Q6V702 233 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 RP9Q8TA86 221 aaKnown RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 AFG1LQ8WV93 481 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 RPL10LQ96L21 214 aaKnown RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 SEPHS2Q99611 448 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 BCO2Q9BYV7 579 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 ELP3Q9H9T3 547 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 ERAP1Q9NZ08 941 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 GMPR2Q9P2T1 348 aaKnown RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 DMTF1Q9Y222 760 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 PIN4Q9Y237 131 aaKnown RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 SCN9AQ15858 1988 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 HEATR9A2RTY3 570 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 LIMK2P53671 638 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 HPCAP84074 193 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 BST2Q10589 180 aaKnown RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 MYBPC3Q14896 1274 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 SLC44A4Q53GD3 710 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 SPANXN3Q5MJ09 141 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 TBCELQ5QJ74 424 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 GPR107Q5VW38 600 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 SYPL2Q5VXT5 272 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 CYP4V2Q6ZWL3 525 aaPredicted RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 APPL2Q8NEU8 664 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 PBXIP1Q96AQ6 731 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 PRICKLE1Q96MT3 831 aaPredicted RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 GPR20Q99678 358 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 SPATC1LQ9H0A9 340 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 H3BNX3 289 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 ZBTB7AO95365 584 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 ATICP31939 592 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 BCAT1P54687 386 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 PLCL1Q15111 1095 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 LIPMQ5VYY2 423 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 GRAMD4Q6IC98 578 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 ANKRD23Q86SG2 305 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 PSTKQ8IV42 348 aaKnown RBP12.9□□□□□ -0.35
VPS52-218ENST00000482399 KLHL32Q96NJ5 620 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 ADNPQ9H2P0 1102 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 PDZD7Q9H5P4 517 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 CDHR5Q9HBB8 845 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 NCKIPSDQ9NZQ3 722 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 GIMAP2Q9UG22 337 aa12.9□□□□□ -0.35
VPS52-218ENST00000482399 COPG1Q9Y678 874 aaKnown RBP12.9□□□□□ -0.35
VPS52-218ENST00000482399 C19orf81C9J6K1 198 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 PSMD12O00232 456 aaPredicted RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 MDM4O15151 490 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 VILLO15195 856 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 SRP72O76094 671 aaKnown RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 RXRBP28702 533 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 LRPAP1P30533 357 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 YAP1P46937 504 aaKnown RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 TKTL1P51854 596 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 CSE1LP55060 971 aaKnown RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 NAA20P61599 178 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 CAPRIN1Q14444 709 aaKnown RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 LPIN1Q14693 890 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 TARBP2Q15633 366 aaKnown RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 PPP1R3AQ16821 1122 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 ZIK1Q3SY52 487 aaPredicted RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 ZFP1Q6P2D0 407 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 PGM2L1Q6PCE3 622 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 ARNTL2Q8WYA1 636 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 TEPSINQ96N21 525 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 FICDQ9BVA6 458 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 CCDC90BQ9GZT6 254 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 ASB7Q9H672 318 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 ZNF408Q9H9D4 720 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 SFMBT1Q9UHJ3 866 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 CROCCQ5TZA2 2017 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 ANKRD33BA6NCL7 494 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 INPP4BO15327 924 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 SNAPC2Q13487 334 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 TAZQ16635 292 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 UTS2BQ765I0 119 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 CHST13Q8NET6 341 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 DNERQ8NFT8 737 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 ING2Q9H160 280 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 FZD8Q9H461 694 aa12.89□□□□□ -0.35
VPS52-218ENST00000482399 SOX17Q9H6I2 414 aaPredicted RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 FBRSL1Q9HCM7 1045 aaKnown RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 PRPF19Q9UMS4 504 aaKnown RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 ZNFX1Q9P2E3 1918 aaKnown RBP12.89□□□□□ -0.35
VPS52-218ENST00000482399 FAM95CA0A1B0GW59 222 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 ATP5BP06576 529 aaKnown RBP12.88□□□□□ -0.35
VPS52-218ENST00000482399 ENTPD1P49961 510 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 XIAPP98170 497 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 FOXD4Q12950 439 aaPredicted RBP12.88□□□□□ -0.35
VPS52-218ENST00000482399 STX5Q13190 355 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 TTLL4Q14679 1199 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 DPYSL2Q16555 572 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 SCIMPQ6UWF3 145 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 HFE2Q6ZVN8 426 aa12.88□□□□□ -0.35
VPS52-218ENST00000482399 SETD3Q86TU7 594 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms