RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TBC1D3GQ6DHY5 549 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 TBC1D3CQ6IPX1 549 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 KLHL10Q6JEL2 608 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 CXorf57Q6NSI4 855 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 GUSBP11Q6P575 273 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 TMEM110Q86TL2 294 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 TRIM59Q8IWR1 403 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 TBC1D3Q8IZP1 549 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 CCAR2Q8N163 923 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 EHBP1Q8NDI1 1231 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 MYOCQ99972 504 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 FUCA2Q9BTY2 467 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 INTS2Q9H0H0 1204 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 FAM204AQ9H8W3 233 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 POPDC2Q9HBU9 364 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 ACP6Q9NPH0 428 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 GEMIN8Q9NWZ8 242 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 MAN1B1Q9UKM7 699 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 PLAAQ9Y263 795 aa9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 SPTBN1Q01082 2364 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-210ENST00000481231 C2CD3Q4AC94 2353 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 LRBAP50851 2863 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 SYNJ2BP-COX16A0A087WUM0 186 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 CPED1A4D0V7 1026 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 GOLGA6L4A6NEF3 574 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 TCAF2A6NFQ2 919 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 PPP1R3GB7ZBB8 358 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 SLC7A4O43246 635 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 PLRG1O43660 514 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 PIAS2O75928 621 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 LETM1O95202 739 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 BMP6P22004 513 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 NNMTP40261 264 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 VASPP50552 380 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 IRAK1P51617 712 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 PLK1P53350 603 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 CNTN1Q12860 1018 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 PDCLQ13371 301 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 STAT4Q14765 748 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 RABGAP1LQ5R372 815 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 TTC39BQ5VTQ0 682 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 AGBL4Q5VU57 503 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 FBXL22Q6P050 247 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 RBM44Q6ZP01 1051 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 DSG4Q86SJ6 1040 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 PRPF39Q86UA1 669 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 IQCHQ86VS3 1027 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 JAMLQ86YT9 394 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 ATP6V0D2Q8N8Y2 350 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 OR52K2Q8NGK3 314 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 WDR36Q8NI36 951 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 NELFBQ8WX92 580 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 OR8D1Q8WZ84 308 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 ALG14Q96F25 216 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 MED15Q96RN5 788 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 FEM1AQ9BSK4 669 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 THAP9Q9H5L6 903 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 DDIT4Q9NX09 232 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 NLGN3Q9NZ94 848 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 COX16Q9P0S2 106 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 SLC12A6Q9UHW9 1150 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 HOOK1Q9UJC3 728 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 PPM1HQ9ULR3 514 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 DMTF1Q9Y222 760 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 CSMD1Q96PZ7 3565 aa9.67□□□□□ -0.86
SMARCE1-210ENST00000481231 ICE1Q9Y2F5 2266 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 K7ESM1 405 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 THAP12O43422 761 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 MED7O43513 233 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 ATP9BO43861 1147 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 MAGEC1O60732 1142 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 ALPPL2P10696 532 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 SLC2A3P11169 496 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 HGFP14210 728 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 GNA15P30679 374 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 CCR1P32246 355 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 NUDT1P36639 197 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 GGCXP38435 758 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 CASRP41180 1078 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 OXCT1P55809 520 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 CDK17Q00537 523 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 KCNMA1Q12791 1236 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 OVGP1Q12889 678 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 ZNF177Q13360 481 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 NCAPHQ15003 741 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 DLG2Q15700 870 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 SETMARQ53H47 684 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 ZNF542PQ5EBM4 170 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 FAM46CQ5VWP2 391 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 FOXR2Q6PJQ5 311 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 Q6ZVU0 165 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 EFL1Q7Z2Z2 1120 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 C14orf80Q86SX3 495 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 TRIM69Q86WT6 500 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 ZNF606Q8WXB4 792 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 TIGD1Q96MW7 591 aa9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 RPRD1AQ96P16 312 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-210ENST00000481231 SLC2A13Q96QE2 648 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms