RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 N4BP2L1Q5TBK1 243 aaPredicted RBP13.14□□□□□ -0.31
ABCF3-215ENST00000481116 AGBL4Q5VU57 503 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 TBC1D3GQ6DHY5 549 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 TBC1D3CQ6IPX1 549 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 DPY19L3Q6ZPD9 716 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 DSG4Q86SJ6 1040 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 TBC1D3Q8IZP1 549 aaPredicted RBP13.14□□□□□ -0.31
ABCF3-215ENST00000481116 DEFB124Q8NES8 71 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 OR2T34Q8NGX1 318 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 GRIN3AQ8TCU5 1115 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 SYN2Q92777 582 aaPredicted RBP13.14□□□□□ -0.31
ABCF3-215ENST00000481116 SNRNP25Q9BV90 132 aaKnown RBP13.14□□□□□ -0.31
ABCF3-215ENST00000481116 THAP2Q9H0W7 228 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 DHX35Q9H5Z1 703 aaKnown RBP13.14□□□□□ -0.31
ABCF3-215ENST00000481116 ARHGAP20Q9P2F6 1191 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 AP4E1Q9UPM8 1137 aa13.14□□□□□ -0.31
ABCF3-215ENST00000481116 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
ABCF3-215ENST00000481116 LRRK1Q38SD2 2015 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 KNL1Q8NG31 2342 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 C1QTNF3-AMACRE9PGA6 284 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 KPNA3O00505 521 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-215ENST00000481116 RAMP2O60895 175 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 LEFTY1O75610 366 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 GJB3O75712 270 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 TCF4P15884 667 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 DESP17661 470 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 MIPP30301 263 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 MAT2AP31153 395 aaKnown RBP13.13□□□□□ -0.31
ABCF3-215ENST00000481116 GKP32189 559 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 CLCN6P51797 869 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 ERMARDQ5T6L9 678 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 FAM46CQ5VWP2 391 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 RETSATQ6NUM9 610 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 CYP4V2Q6ZWL3 525 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-215ENST00000481116 ZNF354CQ86Y25 554 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 RTL3Q8N8U3 475 aaKnown RBP13.13□□□□□ -0.31
ABCF3-215ENST00000481116 OR6K2Q8NGY2 324 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 FAM131CQ96AQ9 280 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 ARHGEF26Q96DR7 871 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 BTBD6Q96KE9 485 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 SLC6A18Q96N87 628 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 KCTD15Q96SI1 283 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-215ENST00000481116 EPAS1Q99814 870 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 TM6SF2Q9BZW4 377 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 MAGEH1Q9H213 219 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 IL36AQ9UHA7 158 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-215ENST00000481116 SNX11Q9Y5W9 270 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 BZW2Q9Y6E2 419 aaKnown RBP13.13□□□□□ -0.31
ABCF3-215ENST00000481116 SCINQ9Y6U3 715 aa13.13□□□□□ -0.31
ABCF3-215ENST00000481116 A0A1W2PPC4 97 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 C10orf142B7Z368 130 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 PLRG1O43660 514 aaKnown RBP13.12□□□□□ -0.31
ABCF3-215ENST00000481116 KDELR3O43731 214 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 LRCH4O75427 683 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 RNF8O76064 485 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 WNT1P04628 370 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 ADRB1P08588 477 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 MYBL1P10243 752 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 CD59P13987 128 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 EIF4A3P38919 411 aaKnown RBP13.12□□□□□ -0.31
ABCF3-215ENST00000481116 RECQLP46063 649 aaPredicted RBP13.12□□□□□ -0.31
ABCF3-215ENST00000481116 AFF3P51826 1226 aaKnown RBP13.12□□□□□ -0.31
ABCF3-215ENST00000481116 CCNHP51946 323 aaPredicted RBP13.12□□□□□ -0.31
ABCF3-215ENST00000481116 AIF1P55008 147 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 TAS2R38P59533 333 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 TPI1P60174 286 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 SLC20A2Q08357 652 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 KIF19Q2TAC6 998 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 HLA-BQ31612 363 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 CARD16Q5EG05 197 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 CCDC122Q5T0U0 273 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 PIP5KL1Q5T9C9 394 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 TMIEQ8NEW7 156 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 KLK6Q92876 244 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 IQCDQ96DY2 449 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 TRIM11Q96F44 468 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 HMCESQ96FZ2 354 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 CELF6Q96J87 481 aaKnown RBP13.12□□□□□ -0.31
ABCF3-215ENST00000481116 CCDC114Q96M63 670 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 CAMK1GQ96NX5 476 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 RETREG1Q9H6L5 497 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 ZDHHC6Q9H6R6 413 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 GAREM1Q9H706 876 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 DNAAF2Q9NVR5 837 aaKnown RBP13.12□□□□□ -0.31
ABCF3-215ENST00000481116 HPCAL4Q9UM19 191 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 ANKRD6Q9Y2G4 727 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.31
ABCF3-215ENST00000481116 WASF2Q9Y6W5 498 aa13.12□□□□□ -0.31
ABCF3-215ENST00000481116 WASH4PA8MWX3 477 aa13.11□□□□□ -0.31
ABCF3-215ENST00000481116 RASA4BC9J798 803 aa13.11□□□□□ -0.31
ABCF3-215ENST00000481116 EEF2KO00418 725 aaKnown RBP13.11□□□□□ -0.31
ABCF3-215ENST00000481116 RASA4O43374 803 aa13.11□□□□□ -0.31
ABCF3-215ENST00000481116 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
ABCF3-215ENST00000481116 BUB1O43683 1085 aa13.11□□□□□ -0.31
ABCF3-215ENST00000481116 SH3BP5O60239 455 aa13.11□□□□□ -0.31
ABCF3-215ENST00000481116 PRPSAP2O60256 369 aa13.11□□□□□ -0.31
ABCF3-215ENST00000481116 PRNPP04156 253 aa13.11□□□□□ -0.31
ABCF3-215ENST00000481116 CSRP1P21291 193 aaKnown RBP13.11□□□□□ -0.31
ABCF3-215ENST00000481116 IL1R2P27930 398 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms