RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 SLC1A1P43005 524 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 MARCKSL1P49006 195 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CDH4P55283 916 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 BNC1Q01954 994 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 NRG1Q02297 640 aaPredicted RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 BYSLQ13895 437 aaKnown RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 FUT11Q495W5 492 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 C5orf22Q49AR2 442 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 ACBD5Q5T8D3 534 aaPredicted RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 TTC39BQ5VTQ0 682 aaPredicted RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 RNF219Q5W0B1 726 aaPredicted RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 CXorf57Q6NSI4 855 aaKnown RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 C11orf63Q6NUN7 778 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 SLC36A4Q6YBV0 504 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 RFX8Q6ZV50 586 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CHST9Q7L1S5 443 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 TRMT11Q7Z4G4 463 aaKnown RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 RHOT1Q8IXI2 618 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CHPFQ8IZ52 775 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 APCDD1Q8J025 514 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 NETO2Q8NC67 525 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 FIBINQ8TAL6 211 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CEP76Q8TAP6 659 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 KIAA1524Q8TCG1 905 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 TEKT4Q8WW24 435 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 SORCS1Q8WY21 1168 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 RNF25Q96BH1 459 aaPredicted RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 CALN1Q9BXU9 219 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 SLC2A11Q9BYW1 496 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 IRX2Q9BZI1 471 aaPredicted RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 TSGA10Q9BZW7 698 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CIPCQ9C0C6 399 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 SLC32A1Q9H598 525 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 PCDH18Q9HCL0 1135 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 NDFIP2Q9NV92 336 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 CWC15Q9P013 229 aaKnown RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 PPARGC1AQ9UBK2 798 aaKnown RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 PACSIN2Q9UNF0 486 aaPredicted RBP9.28□□□□□ -0.92
VCP-206ENST00000480327 NEU3Q9UQ49 428 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 SLCO1B1Q9Y6L6 691 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.28□□□□□ -0.92
VCP-206ENST00000480327 CAPN6Q9Y6Q1 641 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 APC2O95996 2303 aa9.28□□□□□ -0.92
VCP-206ENST00000480327 A0A0D9SEW6 157 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 LRRD1A4D1F6 860 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 H3BRJ5 948 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 OPHN1O60890 802 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 CBFA2T3O75081 653 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 RHOQP17081 205 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 ERCC2P18074 760 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 AMPD1P23109 780 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 ARL4AP40617 200 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 DPP6P42658 865 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 IL12RB1P42701 662 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 DNA2P51530 1060 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 ENPP2Q13822 863 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 DPYSL3Q14195 570 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 LLGL1Q15334 1064 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 DPYSL2Q16555 572 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 IFI16Q16666 785 aaKnown RBP9.27□□□□□ -0.93
VCP-206ENST00000480327 PREPLQ4J6C6 727 aaPredicted RBP9.27□□□□□ -0.93
VCP-206ENST00000480327 ODF2Q5BJF6 829 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 TMEM215Q68D42 235 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 MBLAC2Q68D91 279 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 PEX26Q7Z412 305 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 POLNQ7Z5Q5 900 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 ANKS1BQ7Z6G8 1248 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 NLRP14Q86W24 1093 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 PSTKQ8IV42 348 aaKnown RBP9.27□□□□□ -0.93
VCP-206ENST00000480327 PNPLA1Q8N8W4 532 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 LRRC57Q8N9N7 239 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 OR7D4Q8NG98 312 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 CYB5D2Q8WUJ1 264 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 RAPGEF5Q92565 580 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 KRT35Q92764 455 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 LMLNQ96KR4 655 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 SPON2Q9BUD6 331 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 MKRN2Q9H000 416 aaKnown RBP9.27□□□□□ -0.93
VCP-206ENST00000480327 MUC3BQ9H195 1237 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 IL21RQ9HBE5 538 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 TMEM248Q9NWD8 314 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 KIAA1522Q9P206 1035 aaPredicted RBP9.27□□□□□ -0.93
VCP-206ENST00000480327 INTS6Q9UL03 887 aaKnown RBP9.27□□□□□ -0.93
VCP-206ENST00000480327 SLC27A6Q9Y2P4 619 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 MFHAS1Q9Y4C4 1052 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 STON1Q9Y6Q2 735 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 ACACAQ13085 2346 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 MYLKQ15746 1914 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 DOCK9Q9BZ29 2069 aa9.27□□□□□ -0.93
VCP-206ENST00000480327 USP27XA6NNY8 438 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 ZSCAN12O43309 604 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 ZNF217O75362 1048 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 POLR2EP19388 210 aaKnown RBP9.26□□□□□ -0.93
VCP-206ENST00000480327 KDELR1P24390 212 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 CTSOP43234 321 aaPredicted RBP9.26□□□□□ -0.93
VCP-206ENST00000480327 ARSEP51690 589 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 COPAP53621 1224 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 GNA12Q03113 381 aa9.26□□□□□ -0.93
VCP-206ENST00000480327 GRIK2Q13002 908 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms