RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 CDKL2Q92772 493 aa17.54■□□□□ 0.4
LINC00336-201ENST00000477984 RNF34Q969K3 372 aa17.54■□□□□ 0.4
LINC00336-201ENST00000477984 CMTM5Q96DZ9 223 aa17.54■□□□□ 0.4
LINC00336-201ENST00000477984 VAT1Q99536 393 aa17.54■□□□□ 0.4
LINC00336-201ENST00000477984 TTC1Q99614 292 aa17.54■□□□□ 0.4
LINC00336-201ENST00000477984 CFHR5Q9BXR6 569 aa17.54■□□□□ 0.4
LINC00336-201ENST00000477984 AP1G1O43747 822 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 HTR7P34969 479 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 GARSP41250 739 aaKnown RBP17.53■□□□□ 0.4
LINC00336-201ENST00000477984 SESN2P58004 480 aaPredicted RBP17.53■□□□□ 0.4
LINC00336-201ENST00000477984 LIN52Q52LA3 116 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 CASC4Q6P4E1 433 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 COLGALT2Q8IYK4 626 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 ST13P4Q8IZP2 240 aaPredicted RBP17.53■□□□□ 0.4
LINC00336-201ENST00000477984 PXYLP1Q8TE99 480 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 ISL2Q96A47 359 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 TUBGCP5Q96RT8 1024 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 HAPLN3Q96S86 360 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 GORASP1Q9BQQ3 440 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 SPATA16Q9BXB7 569 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 ZCWPW1Q9H0M4 648 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 EPB41L1Q9H4G0 881 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 FRMPD3Q5JV73 1810 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 PATJQ8NI35 1801 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 NLRC5Q86WI3 1866 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 SIN3BO75182 1162 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 OAZ2O95190 189 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 AP2A1O95782 977 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 ALDOAP04075 364 aaKnown RBP17.53■□□□□ 0.4
LINC00336-201ENST00000477984 UBTFL6P0CB48 400 aaPredicted RBP17.53■□□□□ 0.4
LINC00336-201ENST00000477984 UQCRBP14927 111 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 GRIK1P39086 918 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 PDE1BQ01064 536 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 ZNF33AQ06730 810 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 PCLAFQ15004 111 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 BTBD8Q5XKL5 378 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 PACS1Q6VY07 963 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 CD99L2Q8TCZ2 262 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 PPP4R1Q8TF05 950 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 BTBD9Q96Q07 612 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 KLHL4Q9C0H6 718 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 GBA3Q9H227 469 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 SMOC2Q9H3U7 446 aa17.53■□□□□ 0.4
LINC00336-201ENST00000477984 ERI2A8K979 691 aaKnown RBP17.52■□□□□ 0.4
LINC00336-201ENST00000477984 ZNF195O14628 629 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 PROCP04070 461 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 IDH3AP50213 366 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 CCNIQ14094 377 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 N4BP2L1Q5TBK1 243 aaPredicted RBP17.52■□□□□ 0.4
LINC00336-201ENST00000477984 ITPRIPL1Q6GPH6 555 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 SDCCAG8Q86SQ7 713 aaPredicted RBP17.52■□□□□ 0.4
LINC00336-201ENST00000477984 DCP1BQ8IZD4 617 aaKnown RBP17.52■□□□□ 0.4
LINC00336-201ENST00000477984 STON2Q8WXE9 905 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 DPF3Q92784 378 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 SORT1Q99523 831 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 VCX3AQ9NNX9 186 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 CREBZFQ9NS37 354 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 SYBUQ9NX95 663 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 NDUFA13Q9P0J0 144 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 NEU3Q9UQ49 428 aa17.52■□□□□ 0.4
LINC00336-201ENST00000477984 ITM2AO43736 263 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 BAG2O95816 211 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 PABPC4LP0CB38 370 aaKnown RBP17.51■□□□□ 0.39
LINC00336-201ENST00000477984 HOXC13P31276 330 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 MAGEA12P43365 314 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 COG7P83436 770 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 PDE1CQ14123 709 aaPredicted RBP17.51■□□□□ 0.39
LINC00336-201ENST00000477984 KCTD11Q693B1 232 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 ZCCHC23Q6ZST2 131 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 RAPH1Q70E73 1250 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 SCD5Q86SK9 330 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 RAET1EQ8TD07 263 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 DTNBP1Q96EV8 351 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 ADAM28Q9UKQ2 775 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 COMMD3-BMI1R4GMX3 469 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 PTPRDP23468 1912 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 A0A1W2PQ45 241 aaPredicted RBP17.51■□□□□ 0.39
LINC00336-201ENST00000477984 A0A1W2PQY0 241 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 ZBTB24O43167 697 aaPredicted RBP17.51■□□□□ 0.39
LINC00336-201ENST00000477984 CD68P34810 354 aaPredicted RBP17.51■□□□□ 0.39
LINC00336-201ENST00000477984 POLE2P56282 527 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 CRADDP78560 199 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 SLC25A3Q00325 362 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 ZBTB17Q13105 803 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 MED21Q13503 144 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 SLC39A12Q504Y0 691 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 SPANXN3Q5MJ09 141 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 METTL21CQ5VZV1 264 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 LHX8Q68G74 356 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 MAVSQ7Z434 540 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 RASSF3Q86WH2 238 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 FUBP3Q96I24 572 aaKnown RBP eCLIP17.51■□□□□ 0.39
LINC00336-201ENST00000477984 LBHD1Q9BQE6 289 aaPredicted RBP17.51■□□□□ 0.39
LINC00336-201ENST00000477984 FTHL17Q9BXU8 183 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 EBF3Q9H4W6 596 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 CASS4Q9NQ75 786 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 TBC1D13Q9NVG8 400 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 CDH22Q9UJ99 828 aa17.51■□□□□ 0.39
LINC00336-201ENST00000477984 RNASEH1O60930 286 aaKnown RBP17.5■□□□□ 0.39
LINC00336-201ENST00000477984 PRKCGP05129 697 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms