RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 RETSATQ6NUM9 610 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 C22orf39Q6P5X5 142 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 MAMSTRQ6ZN01 415 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 TRMT11Q7Z4G4 463 aaKnown RBP16.17■□□□□ 0.18
COPS3-207ENST00000477299 FRMD1Q8N878 549 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 OR6K2Q8NGY2 324 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 HMGB4Q8WW32 186 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 EXOC2Q96KP1 924 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 OLFM3Q96PB7 478 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 TPSD1Q9BZJ3 242 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 TM6SF2Q9BZW4 377 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 SP110Q9HB58 689 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 PRMT8Q9NR22 394 aaPredicted RBP16.17■□□□□ 0.18
COPS3-207ENST00000477299 KCND1Q9NSA2 647 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 UBA2Q9UBT2 640 aaPredicted RBP16.17■□□□□ 0.18
COPS3-207ENST00000477299 INVSQ9Y283 1065 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 R3HDM2Q9Y2K5 976 aaKnown RBP16.17■□□□□ 0.18
COPS3-207ENST00000477299 FANCMQ8IYD8 2048 aa16.17■□□□□ 0.18
COPS3-207ENST00000477299 EDDM13A0A1B0GTR0 161 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 PLK4O00444 970 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 KIF5CO60282 957 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 NDUFV2P19404 249 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 PTPN7P35236 360 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 FNTBP49356 437 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 VASPP50552 380 aaPredicted RBP16.16■□□□□ 0.18
COPS3-207ENST00000477299 CCR3P51677 355 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 GNG11P61952 73 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 TFDP2Q14188 446 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 ANGPT1Q15389 498 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 KCTD19Q17RG1 926 aaPredicted RBP16.16■□□□□ 0.18
COPS3-207ENST00000477299 HSF5Q4G112 596 aaPredicted RBP16.16■□□□□ 0.18
COPS3-207ENST00000477299 DPY19L3Q6ZPD9 716 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 ZC3H18Q86VM9 953 aaKnown RBP16.16■□□□□ 0.18
COPS3-207ENST00000477299 PGBD5Q8N414 524 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 ATPAF2Q8N5M1 289 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 KDM1BQ8NB78 822 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 TSEN2Q8NCE0 465 aaKnown RBP16.16■□□□□ 0.18
COPS3-207ENST00000477299 CCNYQ8ND76 341 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 PRSS33Q8NF86 280 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 MDGA1Q8NFP4 955 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 TSTD1Q8NFU3 115 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 OR2A12Q8NGT7 310 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 CCDC26Q8TAB7 109 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 ACTL9Q8TC94 416 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 CEP41Q9BYV8 373 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 DONSONQ9NYP3 566 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 SMARCAL1Q9NZC9 954 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 EBF1Q9UH73 591 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 SUN2Q9UH99 717 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 RAPGEFL1Q9UHV5 662 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 SARDHQ9UL12 918 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 JRKLQ9Y4A0 524 aa16.16■□□□□ 0.18
COPS3-207ENST00000477299 NPC1O15118 1278 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 GALR2O43603 387 aaPredicted RBP16.15■□□□□ 0.18
COPS3-207ENST00000477299 SYNCRIPO60506 623 aaKnown RBP16.15■□□□□ 0.18
COPS3-207ENST00000477299 CTSLP07711 333 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 NNMTP40261 264 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 DGKEP52429 567 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 NRLP54845 237 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 OTUD4Q01804 1114 aaKnown RBP16.15■□□□□ 0.18
COPS3-207ENST00000477299 SLC20A2Q08357 652 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 KLF1Q13351 362 aaPredicted RBP16.15■□□□□ 0.18
COPS3-207ENST00000477299 POM121L1PQ3SYA9 428 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 TMPRSS6Q8IU80 811 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 COG1Q8WTW3 980 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 MS4A14Q96JA4 679 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 MRGPRX1Q96LB2 322 aa16.15■□□□□ 0.18
COPS3-207ENST00000477299 WDFY4Q6ZS81 3184 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 SDK1Q7Z5N4 2213 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 TARSL2A2RTX5 802 aaKnown RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 GOLGA6L9A6NEM1 432 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 ZSCAN5CA6NGD5 496 aaPredicted RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 H0Y858 1186 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 KCNK1O00180 336 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 ZNF185O15231 689 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 PAPSS2O95340 614 aaPredicted RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 ZFXP17010 805 aaPredicted RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 TGM2P21980 687 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 RPS14P62263 151 aaKnown RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 PPIDQ08752 370 aaKnown RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 AP1B1Q10567 949 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 TCF15Q12870 199 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 ZBTB17Q13105 803 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 SRSF5Q13243 272 aaKnown RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 IHHQ14623 411 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 LBRQ14739 615 aaKnown RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 CARD16Q5EG05 197 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 SLC13A5Q86YT5 568 aaPredicted RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 MMAAQ8IVH4 418 aaKnown RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 PGBD3Q8N328 593 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.14■□□□□ 0.17
COPS3-207ENST00000477299 FAM160A2Q8N612 972 aaPredicted RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 OR2T3Q8NH03 318 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 RLN3Q8WXF3 142 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 TSGA13Q96PP4 275 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 IER2Q9BTL4 223 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 POLMQ9NP87 494 aaPredicted RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 EVLQ9UI08 416 aaPredicted RBP16.14■□□□□ 0.17
COPS3-207ENST00000477299 EFR3BQ9Y2G0 817 aa16.14■□□□□ 0.17
COPS3-207ENST00000477299 ZKSCAN5Q9Y2L8 839 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms