RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 TMEFF1Q8IYR6 380 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 CHPFQ8IZ52 775 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 ZNF366Q8N895 744 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 C1orf131Q8NDD1 294 aaKnown RBP8.21□□□□□ -1.1
CHD6-207ENST00000476641 OLIG1Q8TAK6 271 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 DQX1Q8TE96 717 aaKnown RBP8.21□□□□□ -1.1
CHD6-207ENST00000476641 CYB5D2Q8WUJ1 264 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 ZNF606Q8WXB4 792 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 SHC3Q92529 594 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 FAM149B1Q96BN6 582 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 PRICKLE1Q96MT3 831 aaPredicted RBP8.21□□□□□ -1.1
CHD6-207ENST00000476641 XPO6Q96QU8 1125 aaKnown RBP8.21□□□□□ -1.1
CHD6-207ENST00000476641 CPXM1Q96SM3 734 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 CDK5RAP1Q96SZ6 601 aaKnown RBP8.21□□□□□ -1.1
CHD6-207ENST00000476641 RNF32Q9H0A6 362 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 THAP9Q9H5L6 903 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 FSCN3Q9NQT6 498 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 DLL3Q9NYJ7 618 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 CALCOCO1Q9P1Z2 691 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 BCCIPQ9P287 314 aaKnown RBP eCLIP8.21□□□□□ -1.1
CHD6-207ENST00000476641 WDR35Q9P2L0 1181 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 APEX2Q9UBZ4 518 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 FBXO10Q9UK96 956 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 DNAJC12Q9UKB3 198 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 FHOD1Q9Y613 1164 aa8.21□□□□□ -1.1
CHD6-207ENST00000476641 ATXN2Q99700 1313 aaKnown RBP8.21□□□□□ -1.1
CHD6-207ENST00000476641 KNL1Q8NG31 2342 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 KIAA1549LQ6ZVL6 1849 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 KCNJ18B7U540 433 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 EPHB6O15197 1021 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 GRAP2O75791 330 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 MOCS2O96007 188 aaPredicted RBP8.2□□□□□ -1.1
CHD6-207ENST00000476641 IGLV3-27P01718 113 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 ERBB2P04626 1255 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 CELA3AP09093 270 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 NCAM1P13591 858 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 HLA-EP13747 358 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 PRKCHP24723 683 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 HLA-FP30511 346 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 NTSR1P30989 418 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 MPLP40238 635 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 P2RY2P41231 377 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 IL12RB1P42701 662 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 RPL34P49207 117 aaKnown RBP8.2□□□□□ -1.1
CHD6-207ENST00000476641 TBX4P57082 545 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 LMNB2Q03252 620 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 PDCLQ13371 301 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 KCNJ12Q14500 433 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 CSRP2Q16527 193 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 MAN2A1Q16706 1144 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 VWA3BQ502W6 1294 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 PMS2CLQ68D20 193 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 MMS22LQ6ZRQ5 1243 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 DGLUCYQ7Z3D6 616 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 CDH24Q86UP0 819 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 CREG2Q8IUH2 290 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 SCML4Q8N228 414 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 IPO4Q8TEX9 1081 aaKnown RBP8.2□□□□□ -1.1
CHD6-207ENST00000476641 DDI1Q8WTU0 396 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 IRGQQ8WZA9 623 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 ZC3H10Q96K80 434 aaKnown RBP8.2□□□□□ -1.1
CHD6-207ENST00000476641 COX4I2Q96KJ9 171 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 FCRL2Q96LA5 508 aaPredicted RBP8.2□□□□□ -1.1
CHD6-207ENST00000476641 HSFY1Q96LI6 401 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 TUBGCP2Q9BSJ2 902 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 LSM14BQ9BX40 385 aaKnown RBP8.2□□□□□ -1.1
CHD6-207ENST00000476641 DCLK3Q9C098 648 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 NDST4Q9H3R1 872 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 MTG2Q9H4K7 406 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 ABCC13Q9NSE7 274 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 HBS1LQ9Y450 684 aaKnown RBP8.2□□□□□ -1.1
CHD6-207ENST00000476641 NFE2L3Q9Y4A8 694 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 STON1Q9Y6Q2 735 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 EML5Q05BV3 1969 aa8.2□□□□□ -1.1
CHD6-207ENST00000476641 SYNJ2BP-COX16A0A087WUM0 186 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 GTPBP10A4D1E9 387 aaKnown RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 PES1O00541 588 aaKnown RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 TBL1XO60907 577 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 TFE3P19532 575 aaPredicted RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 CD70P32970 193 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 DHPSP49366 369 aaPredicted RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 HARS2P49590 506 aaKnown RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 RPS24P62847 133 aaKnown RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 RAPGEF1Q13905 1077 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 ZNF234Q14588 700 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 DRAP1Q14919 205 aaPredicted RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 STILQ15468 1287 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 FUT11Q495W5 492 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 PTPN20Q4JDL3 420 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 USP39Q53GS9 565 aaKnown RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 C2CD6Q53TS8 623 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 WIPI1Q5MNZ9 446 aaPredicted RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 TAF3Q5VWG9 929 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 KIAA1324Q6UXG2 1013 aaKnown RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 FAM183BPQ6ZVS7 135 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 ANKS1BQ7Z6G8 1248 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 CIR1Q86X95 450 aaPredicted RBP8.19□□□□□ -1.1
CHD6-207ENST00000476641 CFAP52Q8N1V2 620 aa8.19□□□□□ -1.1
CHD6-207ENST00000476641 CPXM2Q8N436 756 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms