RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 RNF103O00237 685 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 CBX4O00257 560 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 TEX33O43247 280 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 LRIG2O94898 1065 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 CD160O95971 181 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 PRNPP04156 253 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 PLEKP08567 350 aaPredicted RBP11.03□□□□□ -0.64
SEC13-214ENST00000476597 ATXN1LP0C7T5 689 aaKnown RBP11.03□□□□□ -0.64
SEC13-214ENST00000476597 FERP16591 822 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 RHOQP17081 205 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 GRK6P43250 576 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 SERPINH1P50454 418 aaKnown RBP11.03□□□□□ -0.64
SEC13-214ENST00000476597 NXPH1P58417 271 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 ARF5P84085 180 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 C1QBPQ07021 282 aaKnown RBP11.03□□□□□ -0.64
SEC13-214ENST00000476597 CCDC15Q0P6D6 951 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 SHBQ15464 509 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 ANO6Q4KMQ2 910 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 SLC45A4Q5BKX6 768 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 CARD16Q5EG05 197 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 ARSIQ5FYB1 569 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 PIP5KL1Q5T9C9 394 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 NAPEPLDQ6IQ20 393 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 NEK5Q6P3R8 708 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 C22orf39Q6P5X5 142 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 DPY19L3Q6ZPD9 716 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 MON1BQ7L1V2 547 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 IRF2BP2Q7Z5L9 587 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 DRC7Q8IY82 874 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 AOPEPQ8N6M6 819 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 CCDC185Q8N715 623 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 MFSD2AQ8NA29 543 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 CHST14Q8NCH0 376 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 FAM172AQ8WUF8 416 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 NTAN1Q96AB6 310 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 ARRDC3Q96B67 414 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 SELENOOQ9BVL4 669 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 HDAC8Q9BY41 377 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 CEP44Q9C0F1 390 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 NAT10Q9H0A0 1025 aaKnown RBP11.03□□□□□ -0.64
SEC13-214ENST00000476597 ERVMER34-1Q9H9K5 563 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 PREBQ9HCU5 417 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 RTN4Q9NQC3 1192 aaKnown RBP11.03□□□□□ -0.64
SEC13-214ENST00000476597 GDF3Q9NR23 364 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 NDFIP2Q9NV92 336 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 TMEM248Q9NWD8 314 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 DMTF1Q9Y222 760 aa11.03□□□□□ -0.64
SEC13-214ENST00000476597 TMEM8BA6NDV4 472 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 SMTNL1A8MU46 457 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 KPNA3O00505 521 aaPredicted RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 TNFSF14O43557 240 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 RNGTTO60942 597 aaKnown RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 CCDC172P0C7W6 258 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 GPD1P21695 349 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 MAT2AP31153 395 aaKnown RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 ACVRL1P37023 503 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 RECQLP46063 649 aaPredicted RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 RXRGP48443 463 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 MAPKAPK2P49137 400 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 ZNF143P52747 638 aaPredicted RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 SCAPQ12770 1279 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 OVGP1Q12889 678 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 PPP1R15BQ5SWA1 713 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 ACAD10Q6JQN1 1059 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 RWDD4Q6NW29 188 aaKnown RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 ERN2Q76MJ5 926 aaKnown RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 SLFN11Q7Z7L1 901 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 IQCHQ86VS3 1027 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 SPATS2Q86XZ4 545 aaKnown RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 PLPP6Q8IY26 295 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 MCOLN2Q8IZK6 566 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 PCDH20Q8N6Y1 951 aaKnown RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 SAP25Q8TEE9 199 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 BAP1Q92560 729 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 ARHGEF2Q92974 986 aaKnown RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 ISG20Q96AZ6 181 aaKnown RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 HEPHQ9BQS7 1158 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 SYT11Q9BT88 431 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 MAGEH1Q9H213 219 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 TNKS2Q9H2K2 1166 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 SEPT11Q9NVA2 429 aaKnown RBP11.02□□□□□ -0.65
SEC13-214ENST00000476597 IL36AQ9UHA7 158 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 DNAI1Q9UI46 699 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 ZMIZ1Q9ULJ6 1067 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 MYO6Q9UM54 1294 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 NEU3Q9UQ49 428 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 WASF2Q9Y6W5 498 aa11.02□□□□□ -0.65
SEC13-214ENST00000476597 PKD1L2Q7Z442 2459 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 ITPR1Q14643 2758 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 A0A1W2PQU0 124 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 PRAMEF26H0Y7S4 382 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 YKT6O15498 198 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 CCP110O43303 1012 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 MAGEC1O60732 1142 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 LEFTY1O75610 366 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 CAPNS1P04632 268 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 TNFAIP3P21580 790 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 L1CAMP32004 1257 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 ETFBP38117 255 aa11.01□□□□□ -0.65
SEC13-214ENST00000476597 DNA2P51530 1060 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms