RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 NLRP14Q86W24 1093 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 TMPRSS12Q86WS5 348 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 FAM114A1Q8IWE2 563 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 SLC22A18ASQ8N1D0 253 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 DCAF4L2Q8NA75 395 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 JOSD2Q8TAC2 188 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 ENOX1Q8TC92 643 aaKnown RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 GPT2Q8TD30 523 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 HNRNPLLQ8WVV9 542 aaKnown RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 KLK6Q92876 244 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 CRELD1Q96HD1 420 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 CNDP2Q96KP4 475 aaKnown RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 BMFQ96LC9 184 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 PPP1R9BQ96SB3 815 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 MYOCQ99972 504 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 SPON2Q9BUD6 331 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 C2orf49Q9BVC5 232 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-207ENST00000475549 NUP62CLQ9H1M0 184 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 HSD3B7Q9H2F3 369 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 PREBQ9HCU5 417 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 FANCLQ9NW38 375 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 UCKL1Q9NWZ5 548 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 RRN3Q9NYV6 651 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 DKK4Q9UBT3 224 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 FTSJ1Q9UET6 329 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 STAP1Q9ULZ2 295 aa7.18□□□□□ -1.26
HDAC3-207ENST00000475549 CEP192Q8TEP8 1941 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 FAM208BQ5VWN6 2430 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 TCRBV5S1A1TA0A578 114 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 ILVBLA1L0T0 632 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 C2CD4BA6NLJ0 364 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 C1QTNF3-AMACRE9PGA6 284 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 PRAMEF26H0Y7S4 382 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 KPNA3O00505 521 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 ENC1O14682 589 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 RAD51BO15315 384 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 SIGLEC6O43699 453 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 LEFTY1O75610 366 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 LDOC1O95751 146 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 MYF5P13349 255 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 EEF1GP26641 437 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 RFC1P35251 1148 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 ADRA1BP35368 520 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 ACVRL1P37023 503 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 ARRB1P49407 418 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 SERPINH1P50454 418 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 HDAC4P56524 1084 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 CLDN2P57739 230 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 POLR2FP61218 127 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 KRT83P78385 493 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 GNA12Q03113 381 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 OVGP1Q12889 678 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 TARDBPQ13148 414 aaKnown RBP eCLIP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 STAT4Q14765 748 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 KRT31Q15323 416 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 COL28A1Q2UY09 1125 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 SOWAHCQ53LP3 525 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 CT47A1Q5JQC4 288 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 TPRG1LQ5T0D9 272 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 NEK5Q6P3R8 708 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 C22orf39Q6P5X5 142 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 FBXL19Q6PCT2 694 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 LRRC31Q6UY01 552 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 ZNF783Q6ZMS7 281 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 GCNT7Q6ZNI0 430 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 RBM43Q6ZSC3 357 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 ERN2Q76MJ5 926 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 HORMAD1Q86X24 394 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 GALNT15Q8N3T1 639 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 CCDC185Q8N715 623 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 PDCD7Q8N8D1 485 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 NETO2Q8NC67 525 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 OR13H1Q8NG92 308 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 GRIN3AQ8TCU5 1115 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 RXFP2Q8WXD0 754 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 CENPIQ92674 756 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 SKA1Q96BD8 255 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 KLHDC7BQ96G42 594 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 BBC3Q96PG8 261 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 KLF6Q99612 283 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 HDAC8Q9BY41 377 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 ZYG11BQ9C0D3 744 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 VPS16Q9H269 839 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 PDCL3Q9H2J4 239 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 NOL6Q9H6R4 1146 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 FZD3Q9NPG1 666 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 METTL5Q9NRN9 209 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 FAM207AQ9NSI2 230 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 PPARGC1AQ9UBK2 798 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 OR12D3Q9UGF7 316 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 IL36AQ9UHA7 158 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 TPX2Q9ULW0 747 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 DMTF1Q9Y222 760 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 SIK3Q9Y2K2 1263 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 FCF1Q9Y324 198 aaKnown RBP7.17□□□□□ -1.26
HDAC3-207ENST00000475549 PCDHGA1Q9Y5H4 931 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 CACNA1GO43497 2377 aa7.17□□□□□ -1.26
HDAC3-207ENST00000475549 IGSF10Q6WRI0 2623 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 CABIN1Q9Y6J0 2220 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms