RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SLC6A18Q96N87 628 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 NAP1L5Q96NT1 182 aaPredicted RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 ACE2Q9BYF1 805 aaPredicted RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 MAGEB5Q9BZ81 275 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 TNKS2Q9H2K2 1166 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 OSGEPQ9NPF4 335 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 TM7SF3Q9NS93 570 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 PPARGC1AQ9UBK2 798 aaKnown RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 DNAI1Q9UI46 699 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 PPM1HQ9ULR3 514 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 MYO6Q9UM54 1294 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 FNDC3AQ9Y2H6 1198 aaKnown RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 SNX11Q9Y5W9 270 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 ASCC3Q8N3C0 2202 aaKnown RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 A0A1W2PQC6 194 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 RNF223E7ERA6 249 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 FAM72CH0Y354 149 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 KCNK3O14649 394 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 CCP110O43303 1012 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 LRIG2O94898 1065 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 RHOQP17081 205 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 SPINK2P20155 84 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 MAT2AP31153 395 aaKnown RBP9.63□□□□□ -0.87
PDPN-204ENST00000475043 CHRNA3P32297 505 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 SERPINH1P50454 418 aaKnown RBP9.63□□□□□ -0.87
PDPN-204ENST00000475043 DNA2P51530 1060 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 CCR5P51681 352 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 ZNF143P52747 638 aaPredicted RBP9.63□□□□□ -0.87
PDPN-204ENST00000475043 PPP2CBP62714 309 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 RACK1P63244 317 aaKnown RBP9.63□□□□□ -0.87
PDPN-204ENST00000475043 PPP2CAP67775 309 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 FAM193AP78312 1265 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 CNTN1Q12860 1018 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 HNRNPDQ14103 355 aaKnown RBP9.63□□□□□ -0.87
PDPN-204ENST00000475043 IQCB1Q15051 598 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 TRIP6Q15654 476 aaKnown RBP9.63□□□□□ -0.87
PDPN-204ENST00000475043 EFHC2Q5JST6 749 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 FAM72AQ5TYM5 149 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 SFMBT2Q5VUG0 894 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 FAM72DQ6L9T8 149 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 C22orf39Q6P5X5 142 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 PRPF39Q86UA1 669 aaKnown RBP9.63□□□□□ -0.87
PDPN-204ENST00000475043 LUZP1Q86V48 1076 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 FAM72BQ86X60 149 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 ZNF354CQ86Y25 554 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 MCOLN2Q8IZK6 566 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 OR2A12Q8NGT7 310 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 GRIN3AQ8TCU5 1115 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 BAP1Q92560 729 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 CENPIQ92674 756 aaPredicted RBP9.63□□□□□ -0.87
PDPN-204ENST00000475043 SKA1Q96BD8 255 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 TBC1D31Q96DN5 1066 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 SERAC1Q96JX3 654 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 FUCA2Q9BTY2 467 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 OSBPL2Q9H1P3 480 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 HAUS4Q9H6D7 363 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 EBF2Q9HAK2 575 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 DYRK4Q9NR20 520 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 NDFIP2Q9NV92 336 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 TAS2R14Q9NYV8 317 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 ZNF212Q9UDV6 495 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 HPCAL4Q9UM19 191 aa9.63□□□□□ -0.87
PDPN-204ENST00000475043 A0A1B0GTH6 734 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 TCRBV5S1A1TA0A578 114 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 GOLGA6L19H0YKK7 550 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 VILLO15195 856 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 SLC7A4O43246 635 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 PLRG1O43660 514 aaKnown RBP9.62□□□□□ -0.87
PDPN-204ENST00000475043 CREB3O43889 395 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 TOP3BO95985 862 aaKnown RBP9.62□□□□□ -0.87
PDPN-204ENST00000475043 PRNPP04156 253 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 CTSLP07711 333 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 ZNF883P0CG24 379 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 CD38P28907 300 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 EPHB2P29323 1055 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 ACVRL1P37023 503 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 ETFBP38117 255 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 MAPKAPK2P49137 400 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 ARF5P84085 180 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 SHC2P98077 582 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 IL9RQ01113 521 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 NRG1Q02297 640 aaPredicted RBP9.62□□□□□ -0.87
PDPN-204ENST00000475043 KLHL30Q0D2K2 578 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 CCDC15Q0P6D6 951 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 NR1I3Q14994 352 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 SUZ12Q15022 739 aaKnown RBP9.62□□□□□ -0.87
PDPN-204ENST00000475043 SLC45A4Q5BKX6 768 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 KCNT1Q5JUK3 1230 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 ARTNQ5T4W7 220 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 MANEALQ5VSG8 457 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 AGBL4Q5VU57 503 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 PPP1R2P3Q6NXS1 205 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 PYROXD2Q8N2H3 581 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 RYBPQ8N488 228 aaPredicted RBP9.62□□□□□ -0.87
PDPN-204ENST00000475043 CHST14Q8NCH0 376 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 NTAN1Q96AB6 310 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 ORAI3Q9BRQ5 295 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 CNPY3Q9BT09 278 aa9.62□□□□□ -0.87
PDPN-204ENST00000475043 SCNM1Q9BWG6 230 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms