RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 TTC19Q6DKK2 380 aaPredicted RBP20.14■□□□□ 0.81
SSR1-204ENST00000474597 ELMSAN1Q6PJG2 1045 aa20.14■□□□□ 0.81
SSR1-204ENST00000474597 ADGRD1Q6QNK2 874 aa20.14■□□□□ 0.81
SSR1-204ENST00000474597 Q6ZNB5 142 aa20.14■□□□□ 0.81
SSR1-204ENST00000474597 OR7D4Q8NG98 312 aa20.14■□□□□ 0.81
SSR1-204ENST00000474597 ARNTL2Q8WYA1 636 aa20.14■□□□□ 0.81
SSR1-204ENST00000474597 TMA16Q96EY4 203 aaKnown RBP20.14■□□□□ 0.81
SSR1-204ENST00000474597 ZNF599Q96NL3 588 aa20.14■□□□□ 0.81
SSR1-204ENST00000474597 DHRS4Q9BTZ2 278 aa20.14■□□□□ 0.81
SSR1-204ENST00000474597 LAMA2P24043 3122 aaKnown RBP20.14■□□□□ 0.81
SSR1-204ENST00000474597 HELZP42694 1942 aaKnown RBP20.14■□□□□ 0.81
SSR1-204ENST00000474597 PMPCBO75439 489 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 DDX6P26196 483 aaKnown RBP eCLIP20.13■□□□□ 0.816e-8■□□□□ 9.2
SSR1-204ENST00000474597 NUMBP49757 651 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 ERVK-21P61565 698 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 GUCY1A3Q02108 690 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 STEAP4Q687X5 459 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 LEKR1Q6ZMV7 388 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 PRPF39Q86UA1 669 aaKnown RBP20.13■□□□□ 0.81
SSR1-204ENST00000474597 LRRC6Q86X45 466 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 CARNMT1Q8N4J0 409 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 PPM1NQ8N819 430 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 SLC44A1Q8WWI5 657 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 TRIM56Q9BRZ2 755 aaKnown RBP20.13■□□□□ 0.81
SSR1-204ENST00000474597 FICDQ9BVA6 458 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 IL22Q9GZX6 179 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 MUC3BQ9H195 1237 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 ACTL7BQ9Y614 415 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 DOCK6Q96HP0 2047 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.13■□□□□ 0.81
SSR1-204ENST00000474597 PER2O15055 1255 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 ATP9BO43861 1147 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 GREM1O60565 184 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 RHOP08100 348 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 AVPR1AP37288 418 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 MAXP61244 160 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 HTR3DQ70Z44 454 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 LEMD2Q8NC56 503 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 SHKBP1Q8TBC3 707 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 DCAKDQ8WVC6 231 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 SLC46A2Q9BY10 475 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 PLAC1Q9HBJ0 212 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 ATP13A1Q9HD20 1204 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 KCNK9Q9NPC2 374 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 PPANQ9NQ55 473 aaKnown RBP20.13■□□□□ 0.81
SSR1-204ENST00000474597 SENP1Q9P0U3 644 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 DNMT3BQ9UBC3 853 aaKnown RBP20.13■□□□□ 0.81
SSR1-204ENST00000474597 TBC1D30Q9Y2I9 924 aa20.13■□□□□ 0.81
SSR1-204ENST00000474597 IQANK1A0A1B0GTG1 560 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 MAGEB16A2A368 324 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 KDELR3O43731 214 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 SHOX2O60902 331 aaPredicted RBP20.12■□□□□ 0.81
SSR1-204ENST00000474597 BRAFP15056 766 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 GBP2P32456 591 aaPredicted RBP20.12■□□□□ 0.81
SSR1-204ENST00000474597 CCR2P41597 374 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 EPHA5P54756 1037 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 CRYMQ14894 314 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 SPANXN3Q5MJ09 141 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 CERCAMQ5T4B2 595 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 RNF219Q5W0B1 726 aaPredicted RBP20.12■□□□□ 0.81
SSR1-204ENST00000474597 RBM23Q86U06 439 aaKnown RBP20.12■□□□□ 0.81
SSR1-204ENST00000474597 TRABD2AQ86V40 505 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 SLC26A11Q86WA9 606 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 OR52K2Q8NGK3 314 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 CDKL2Q92772 493 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 IMP4Q96G21 291 aaKnown RBP20.12■□□□□ 0.81
SSR1-204ENST00000474597 POLR1EQ9GZS1 481 aaKnown RBP20.12■□□□□ 0.81
SSR1-204ENST00000474597 UBA2Q9UBT2 640 aaPredicted RBP20.12■□□□□ 0.81
SSR1-204ENST00000474597 RPS6KL1Q9Y6S9 549 aa20.12■□□□□ 0.81
SSR1-204ENST00000474597 FOXO6A8MYZ6 492 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 LEFTY2O00292 366 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 HOXD9P28356 352 aaPredicted RBP20.11■□□□□ 0.81
SSR1-204ENST00000474597 CD86P42081 329 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 TNK2Q07912 1038 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 TEAD2Q15562 447 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 PCSK7Q16549 785 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 TRMT10BQ6PF06 316 aaKnown RBP20.11■□□□□ 0.81
SSR1-204ENST00000474597 ZNF783Q6ZMS7 281 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 CYS1Q717R9 158 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 CCDC117Q8IWD4 279 aaPredicted RBP20.11■□□□□ 0.81
SSR1-204ENST00000474597 FAM217AQ8IXS0 508 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 TCEAL4Q96EI5 215 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 CERS4Q9HA82 394 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 PDFQ9HBH1 243 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 VPS45Q9NRW7 570 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.11■□□□□ 0.81
SSR1-204ENST00000474597 ARHGAP26Q9UNA1 814 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 NRG2O14511 850 aaPredicted RBP20.11■□□□□ 0.81
SSR1-204ENST00000474597 LUC7L3O95232 432 aaKnown RBP20.11■□□□□ 0.81
SSR1-204ENST00000474597 CHN1P15882 459 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 TPH1P17752 444 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 DSC2Q02487 901 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 CDH18Q13634 790 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 LGSNQ5TDP6 509 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 TDRD5Q8NAT2 981 aaKnown RBP20.11■□□□□ 0.81
SSR1-204ENST00000474597 MDM1Q8TC05 714 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 DDI1Q8WTU0 396 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 TTC17Q96AE7 1141 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 SMC6Q96SB8 1091 aa20.11■□□□□ 0.81
SSR1-204ENST00000474597 ZDHHC7Q9NXF8 308 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms