RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 HDAC11Q96DB2 347 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 CELF6Q96J87 481 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 FEM1AQ9BSK4 669 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 SMARCAL1Q9NZC9 954 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 SAE1Q9UBE0 346 aaPredicted RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 INTS6Q9UL03 887 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 MMP17Q9ULZ9 603 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 R3HDM2Q9Y2K5 976 aaKnown RBP9.29□□□□□ -0.92
SMG5-203ENST00000473643 HEY1Q9Y5J3 304 aa9.29□□□□□ -0.92
SMG5-203ENST00000473643 GOLGA6L10A0A0M3HER8 536 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 TBC1D3BA6NDS4 549 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 PPP1R12AO14974 1030 aaPredicted RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 MCF2LO15068 1137 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 TRIM24O15164 1050 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 MATN3O15232 486 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 TIMM44O43615 452 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 MAFKO60675 156 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 PRAMEF11O60813 436 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 PHF2O75151 1096 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 APBB3O95704 486 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 PEX11BO96011 259 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 ITGAVP06756 1048 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 RBP3P10745 1247 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 PABPC1P11940 636 aaKnown RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 STIP1P31948 543 aaKnown RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 CHRNA3P32297 505 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 ACVRL1P37023 503 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 CSKP41240 450 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 FNTAP49354 379 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 DGKGP49619 791 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 VASPP50552 380 aaPredicted RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 DGKEP52429 567 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 EIF3EP60228 445 aaKnown RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 SULT2A1Q06520 285 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 IL10RBQ08334 325 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 SLC20A2Q08357 652 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 PRKD1Q15139 912 aaPredicted RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 CRY1Q16526 586 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 SLC45A4Q5BKX6 768 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 GRAMD4Q6IC98 578 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 ADAT2Q7Z6V5 191 aaKnown RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 ADIPOR2Q86V24 386 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 KIAA2013Q8IYS2 634 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 AHI1Q8N157 1196 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 CEP112Q8N8E3 955 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 DCAF4L2Q8NA75 395 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 IL17RCQ8NAC3 791 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 MNS1Q8NEH6 495 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 OR7D4Q8NG98 312 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 WFIKKN2Q8TEU8 576 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 C1orf54Q8WWF1 131 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 GAB3Q8WWW8 586 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 MAML1Q92585 1016 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 HAUS1Q96CS2 278 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 HMCESQ96FZ2 354 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 ZNF599Q96NL3 588 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 QKIQ96PU8 341 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMG5-203ENST00000473643 AP1M1Q9BXS5 423 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 PDFQ9HBH1 243 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 USP29Q9HBJ7 922 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 ABCB8Q9NUT2 735 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 DNAJC17Q9NVM6 304 aaKnown RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 NCDNQ9UBB6 729 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 FEZ2Q9UHY8 353 aaPredicted RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 IPO11Q9UI26 975 aaKnown RBP9.28□□□□□ -0.92
SMG5-203ENST00000473643 GGA2Q9UJY4 613 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 HCN2Q9UL51 889 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 DNPEPQ9ULA0 475 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 RAB23Q9ULC3 237 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 CACNA1AO00555 2505 aa9.28□□□□□ -0.92
SMG5-203ENST00000473643 SDK1Q7Z5N4 2213 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 CFAP69A5D8W1 941 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 ZSCAN5CA6NGD5 496 aaPredicted RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 SGK1O00141 431 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 DFFAO00273 331 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 AXIN1O15169 862 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 MTSS1O43312 755 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 LRP3O75074 770 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 ADAM23O75077 832 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 RPP40O75818 363 aaKnown RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 MAP3K6O95382 1288 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 CD160O95971 181 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 HNRNPLP14866 589 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMG5-203ENST00000473643 COILP38432 576 aaPredicted RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 SEC13P55735 322 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 ARF5P84085 180 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 BYSLQ13895 437 aaKnown RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 HNRNPDQ14103 355 aaKnown RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 EIF4HQ15056 248 aaKnown RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 GEN1Q17RS7 908 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 INO80DQ53TQ3 878 aaPredicted RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 PITRM1Q5JRX3 1037 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 TMCO4Q5TGY1 634 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 TMEM215Q68D42 235 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 IL31Q6EBC2 164 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 TIGD7Q6NT04 549 aaPredicted RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 TMEM92Q6UXU6 159 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 PRR23BQ6ZRT6 265 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 NUDT18Q6ZVK8 323 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 ZC3H18Q86VM9 953 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms