RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 TRIM69Q86WT6 500 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 CCAR2Q8N163 923 aaKnown RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 OR4C6Q8NH72 309 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 ERCC4Q92889 916 aaPredicted RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 SLC39A13Q96H72 371 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 CCDC114Q96M63 670 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 RPRD1AQ96P16 312 aaPredicted RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 MED15Q96RN5 788 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 MYOCQ99972 504 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 NCAPGQ9BPX3 1015 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 SRRTQ9BXP5 876 aaKnown RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 CALN1Q9BXU9 219 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 SCAND2PQ9GZW5 306 aaPredicted RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 FAM204AQ9H8W3 233 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 POPDC2Q9HBU9 364 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 METTL14Q9HCE5 456 aaKnown RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 PREBQ9HCU5 417 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 DYRK4Q9NR20 520 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 TMEM63CQ9P1W3 806 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 XPO7Q9UIA9 1087 aaKnown RBP7.11□□□□□ -1.27
CKS1B-205ENST00000473344 VPS28Q9UK41 221 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 TMEM131Q92545 1883 aa7.11□□□□□ -1.27
CKS1B-205ENST00000473344 SYNJ2BP-COX16A0A087WUM0 186 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 FAM237AA0A1B0GTK4 181 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 A0A1B0GVM2 712 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 TCAF2A6NFQ2 919 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 RNF225M0QZC1 329 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 KPNA3O00505 521 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 TRIM38O00635 465 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 MCF2LO15068 1137 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 ALOX15BO15296 676 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 SLC31A1O15431 190 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 KLK10O43240 276 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 MED7O43513 233 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 TRUB2O95900 331 aaKnown RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 SLC2A3P11169 496 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 CKMT1AP12532 417 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 KRT5P13647 590 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 PRLRP16471 622 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 CASQ1P31415 396 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 AKT2P31751 481 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 CCR1P32246 355 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 DUSP3P51452 185 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 METAP1P53582 386 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 ERVPABLB-1P60509 514 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 UBE2HP62256 183 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 CNTN1Q12860 1018 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 MTA1Q13330 715 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 ZNF177Q13360 481 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 STIM1Q13586 685 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 DLG2Q15700 870 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 CCDC40Q4G0X9 1142 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 ZNF658Q5TYW1 1059 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 AGBL4Q5VU57 503 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 SYPL2Q5VXT5 272 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 ANKRD40Q6AI12 368 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 NEK5Q6P3R8 708 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 Q6ZVU0 165 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 RRAGAQ7L523 313 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 KANSL1Q7Z3B3 1105 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 CIR1Q86X95 450 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 HOMEZQ8IX15 550 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 SLC25A45Q8N413 288 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 UBR7Q8N806 425 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 ATP11CQ8NB49 1132 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 GPT2Q8TD30 523 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 FRS2Q8WU20 508 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 KCNE4Q8WWG9 221 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 SLC35C1Q96A29 364 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 DUSP23Q9BVJ7 150 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 DPH1Q9BZG8 443 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 MUC3BQ9H195 1237 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 OSBPL2Q9H1P3 480 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 THAP9Q9H5L6 903 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 CPNE5Q9HCH3 593 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 THSD1Q9NS62 852 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 KLHL11Q9NVR0 708 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 FAM53CQ9NYF3 392 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 PSD3Q9NYI0 1048 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 COX16Q9P0S2 106 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 FEZ2Q9UHY8 353 aaPredicted RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 HOOK1Q9UJC3 728 aaKnown RBP7.1□□□□□ -1.27
CKS1B-205ENST00000473344 SARDHQ9UL12 918 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 PPM1HQ9ULR3 514 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 PCDHB1Q9Y5F3 818 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 PLXNA2O75051 1894 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 MGAQ8IWI9 3026 aa7.1□□□□□ -1.27
CKS1B-205ENST00000473344 APC2O95996 2303 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 A0A1W2PQ27 194 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 A0A1W2PQ64 194 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 A0A1W2PQU0 124 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 TRIM49BA6NDI0 452 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 GOLGA6L4A6NEF3 574 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 C10orf142B7Z368 130 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 E5RJQ4 531 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 PSMA7O14818 248 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 CAPN5O15484 640 aaPredicted RBP7.09□□□□□ -1.27
CKS1B-205ENST00000473344 SIAH2O43255 324 aa7.09□□□□□ -1.27
CKS1B-205ENST00000473344 ATP9BO43861 1147 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms