RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ARL13BQ3SXY8 428 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 SETMARQ53H47 684 aaPredicted RBP15.63■□□□□ 0.09
VTI1A-203ENST00000472892 SASS6Q6UVJ0 657 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 PHLDB2Q86SQ0 1253 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 CHST14Q8NCH0 376 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 JOSD2Q8TAC2 188 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 CENPIQ92674 756 aaPredicted RBP15.63■□□□□ 0.09
VTI1A-203ENST00000472892 ARRDC3Q96B67 414 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 GBP4Q96PP9 640 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 C11orf70Q9BRQ4 267 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 SPON2Q9BUD6 331 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 HDAC8Q9BY41 377 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 ANO10Q9NW15 660 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 FTSJ1Q9UET6 329 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 OR12D3Q9UGF7 316 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 DMXL2Q8TDJ6 3036 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 KPNA3O00505 521 aaPredicted RBP15.62■□□□□ 0.09
VTI1A-203ENST00000472892 EPHA8P29322 1005 aaPredicted RBP15.62■□□□□ 0.09
VTI1A-203ENST00000472892 GSCP56915 257 aaPredicted RBP15.62■□□□□ 0.09
VTI1A-203ENST00000472892 ARF5P84085 180 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 MYL5Q02045 173 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 SMAD1Q15797 465 aaKnown RBP15.62■□□□□ 0.09
VTI1A-203ENST00000472892 C15orf59Q2T9L4 293 aaPredicted RBP15.62■□□□□ 0.09
VTI1A-203ENST00000472892 ARSIQ5FYB1 569 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 MANEALQ5VSG8 457 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 C22orf39Q6P5X5 142 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 DPY19L3Q6ZPD9 716 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 STRADAQ7RTN6 431 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 PROSER1Q86XN7 944 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 PHF13Q86YI8 300 aaPredicted RBP15.62■□□□□ 0.09
VTI1A-203ENST00000472892 GALNT15Q8N3T1 639 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 OXR1Q8N573 874 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 CEP44Q9C0F1 390 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 TNKS2Q9H2K2 1166 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 ATP13A1Q9HD20 1204 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 IL36AQ9UHA7 158 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 PLXNB3Q9ULL4 1909 aa15.62■□□□□ 0.09
VTI1A-203ENST00000472892 FREM2Q5SZK8 3169 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 A0A1W2PQU0 124 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 LGALS16A8MUM7 142 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 LDOC1O95751 146 aaPredicted RBP15.61■□□□□ 0.09
VTI1A-203ENST00000472892 CD160O95971 181 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 KRT3P12035 628 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 RECQLP46063 649 aaPredicted RBP15.61■□□□□ 0.09
VTI1A-203ENST00000472892 SERPINH1P50454 418 aaKnown RBP15.61■□□□□ 0.09
VTI1A-203ENST00000472892 BNIP3Q12983 259 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 CDO1Q16878 200 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 CLEC16AQ2KHT3 1053 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 ERN2Q76MJ5 926 aaKnown RBP15.61■□□□□ 0.09
VTI1A-203ENST00000472892 APTXQ7Z2E3 356 aaKnown RBP15.61■□□□□ 0.09
VTI1A-203ENST00000472892 KANSL1Q7Z3B3 1105 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 NLRP14Q86W24 1093 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 DRC7Q8IY82 874 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 PCDH20Q8N6Y1 951 aaKnown RBP15.61■□□□□ 0.09
VTI1A-203ENST00000472892 TMEM145Q8NBT3 493 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 ANKRD20A12PQ8NF67 263 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 NEK11Q8NG66 645 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 ERGIC2Q96RQ1 377 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 DYRK4Q9NR20 520 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 ADAM22Q9P0K1 906 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 PCDHGA1Q9Y5H4 931 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 WASF2Q9Y6W5 498 aa15.61■□□□□ 0.09
VTI1A-203ENST00000472892 SIGLEC16A6NMB1 481 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 FAM72CH0Y354 149 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 LEFTY1O75610 366 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 GJB6O95452 261 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 C1SP09871 688 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 RHOQP17081 205 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 RFC1P35251 1148 aaPredicted RBP15.6■□□□□ 0.09
VTI1A-203ENST00000472892 ETFBP38117 255 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 NSFP46459 744 aaKnown RBP15.6■□□□□ 0.09
VTI1A-203ENST00000472892 MAPKAPK2P49137 400 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 HDAC4P56524 1084 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 UBXN1Q04323 297 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 NCAPHQ15003 741 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 STX1AQ16623 288 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 ZNF284Q2VY69 593 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 CARD16Q5EG05 197 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 FAM72AQ5TYM5 149 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 SFMBT2Q5VUG0 894 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 FAM72DQ6L9T8 149 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 HORMAD1Q86X24 394 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 FAM72BQ86X60 149 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 PLPP6Q8IY26 295 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 EID2Q8N6I1 236 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 ISG20Q96AZ6 181 aaKnown RBP15.6■□□□□ 0.09
VTI1A-203ENST00000472892 KLHDC7BQ96G42 594 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 CNDP2Q96KP4 475 aaKnown RBP15.6■□□□□ 0.09
VTI1A-203ENST00000472892 PCMTD1Q96MG8 357 aaPredicted RBP15.6■□□□□ 0.09
VTI1A-203ENST00000472892 HEPHQ9BQS7 1158 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 MAGEB5Q9BZ81 275 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 HSD3B7Q9H2F3 369 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 CCDC86Q9H6F5 360 aaKnown RBP15.6■□□□□ 0.09
VTI1A-203ENST00000472892 NDFIP2Q9NV92 336 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 TMEM248Q9NWD8 314 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 CA5BQ9Y2D0 317 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 PTPRBP23467 1997 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 DOCK4Q8N1I0 1966 aa15.6■□□□□ 0.09
VTI1A-203ENST00000472892 COL5A1P20908 1838 aaPredicted RBP15.59■□□□□ 0.09
VTI1A-203ENST00000472892 TCRBV5S1A1TA0A578 114 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms