RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 MFSD11O43934 449 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 PRAMEF11O60813 436 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 RNASEH1O60930 286 aaKnown RBP20.13■□□□□ 0.81
HDAC7-220ENST00000471235 TMCC1O94876 653 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 DNTTP04053 509 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 TNNT1P13805 278 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 TTC31Q49AM3 519 aaPredicted RBP20.13■□□□□ 0.81
HDAC7-220ENST00000471235 ANKRD20A8PQ5CZ79 823 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 NCBP2-AS2Q69YL0 99 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 ARHGAP36Q6ZRI8 547 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 DAAM2Q86T65 1068 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 MAP7D3Q8IWC1 876 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 TXLNBQ8N3L3 684 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 LZTR1Q8N653 840 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 OR2A12Q8NGT7 310 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 CALR3Q96L12 384 aaKnown RBP20.13■□□□□ 0.81
HDAC7-220ENST00000471235 CCDC114Q96M63 670 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 ADGRG1Q9Y653 693 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 USP34Q70CQ2 3546 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 GPR179Q6PRD1 2367 aa20.13■□□□□ 0.81
HDAC7-220ENST00000471235 C3orf70A6NLC5 250 aaPredicted RBP20.12■□□□□ 0.81
HDAC7-220ENST00000471235 J3KR12 359 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 MCF2LO15068 1137 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 SERPINB6P35237 376 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 ELF2Q15723 593 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 LAIR1Q6GTX8 287 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 SLC36A4Q6YBV0 504 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 CHST14Q8NCH0 376 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 ISG20Q96AZ6 181 aaKnown RBP20.12■□□□□ 0.81
HDAC7-220ENST00000471235 TM6SF2Q9BZW4 377 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 SP110Q9HB58 689 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 DDX56Q9NY93 547 aaKnown RBP20.12■□□□□ 0.81
HDAC7-220ENST00000471235 UBA2Q9UBT2 640 aaPredicted RBP20.12■□□□□ 0.81
HDAC7-220ENST00000471235 SCML1Q9UN30 329 aa20.12■□□□□ 0.81
HDAC7-220ENST00000471235 GRID2IPA4D2P6 1211 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 ZNF487B1APH4 448 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 GFRA3O60609 400 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 RHOBTB1O94844 696 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 ADH1BP00325 375 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 CTSLP07711 333 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 CD6P30203 668 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 MARCKSL1P49006 195 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 METAP1P53582 386 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 NAP1L1P55209 391 aaKnown RBP20.11■□□□□ 0.81
HDAC7-220ENST00000471235 KIF5AQ12840 1032 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 DPY19L3Q6ZPD9 716 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 DSG4Q86SJ6 1040 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 FAM124AQ86V42 546 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 VSIG1Q86XK7 387 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 PQLC3Q8N755 202 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 CASKIN2Q8WXE0 1202 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 WSB2Q9NYS7 404 aaPredicted RBP20.11■□□□□ 0.81
HDAC7-220ENST00000471235 SERGEFQ9UGK8 458 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 SARDHQ9UL12 918 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 ADAMTS9Q9P2N4 1935 aa20.11■□□□□ 0.81
HDAC7-220ENST00000471235 LRRK1Q38SD2 2015 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 A0A1W2PP55 124 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 MACROD2A1Z1Q3 448 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 MAP3K13O43283 966 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 EPN2O95208 641 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 GSRP00390 522 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 IL1BP01584 269 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 OXTRP30559 389 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 CHRNA3P32297 505 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 SLC8A1P32418 973 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 RECQLP46063 649 aaPredicted RBP20.1■□□□□ 0.81
HDAC7-220ENST00000471235 DNA2P51530 1060 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 CCNHP51946 323 aaPredicted RBP20.1■□□□□ 0.81
HDAC7-220ENST00000471235 RPL6Q02878 288 aaKnown RBP20.1■□□□□ 0.81
HDAC7-220ENST00000471235 PAFAH1B3Q15102 231 aaKnown RBP20.1■□□□□ 0.81
HDAC7-220ENST00000471235 INO80DQ53TQ3 878 aaPredicted RBP20.1■□□□□ 0.81
HDAC7-220ENST00000471235 CARD16Q5EG05 197 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 USP30Q70CQ3 517 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 LPCAT2Q7L5N7 544 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 TMEFF1Q8IYR6 380 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 AADATQ8N5Z0 425 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 LRRC57Q8N9N7 239 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 PIP4K2CQ8TBX8 421 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 KRT35Q92764 455 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 TOE1Q96GM8 510 aaKnown RBP20.1■□□□□ 0.81
HDAC7-220ENST00000471235 RNF157Q96PX1 679 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 NCDNQ9UBB6 729 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 LHX3Q9UBR4 397 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 IPO11Q9UI26 975 aaKnown RBP20.1■□□□□ 0.81
HDAC7-220ENST00000471235 PPM1HQ9ULR3 514 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 FARP1Q9Y4F1 1045 aaPredicted RBP20.1■□□□□ 0.81
HDAC7-220ENST00000471235 WASF2Q9Y6W5 498 aa20.1■□□□□ 0.81
HDAC7-220ENST00000471235 FAM186AA6NE01 2351 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 C1QTNF3-AMACRE9PGA6 284 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 RNF103O00237 685 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 C5AR1P21730 350 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 DRD3P35462 400 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 RHOAP61586 193 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 IL10RBQ08334 325 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 CYTH1Q15438 398 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 ATXN7L2Q5T6C5 722 aaPredicted RBP20.09■□□□□ 0.81
HDAC7-220ENST00000471235 KATNAL2Q8IYT4 538 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 ATPAF2Q8N5M1 289 aa20.09■□□□□ 0.81
HDAC7-220ENST00000471235 OR2AP1Q8NGE2 309 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms