RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	TM9SF1	O15321	606 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	KDELR3	O43731	214 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	BANF1	O75531	89 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	ZWINT	O95229	277 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	CYBB	P04839	570 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	CKM	P06732	381 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	RHOC	P08134	193 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	SNRPA	P09012	282 aa	Known RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	MGAT1	P26572	445 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	GCA	P28676	217 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	SLC6A4	P31645	630 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	SESN2	P58004	480 aa	Predicted RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	MGAT5	Q09328	741 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	CRYM	Q14894	314 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	KBTBD12	Q3ZCT8	623 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	SYCP2L	Q5T4T6	812 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	UBAP2	Q5T6F2	1119 aa	Known RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	PLPP4	Q5VZY2	271 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	ALG1L	Q6GMV1	187 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463		Q6ZNB5	142 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	MARK2	Q7KZI7	788 aa	Known RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	NLRP9	Q7RTR0	991 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	TMEM135	Q86UB9	458 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	IGDCC3	Q8IVU1	814 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	CTAGE3P	Q8IX95	158 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	SRRM1	Q8IYB3	904 aa	Known RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	PPHLN1	Q8NEY8	458 aa	Known RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	OR52K1	Q8NGK4	314 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	DEPDC1B	Q8WUY9	529 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	DCAKD	Q8WVC6	231 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	PABPC5	Q96DU9	382 aa	Known RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	TMA16	Q96EY4	203 aa	Known RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	ZFR	Q96KR1	1074 aa	Known RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	MLPH	Q9BV36	600 aa	Predicted RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	LRRC3	Q9BY71	257 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	EPN3	Q9H201	632 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	TRABD	Q9H4I3	376 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	TBK1	Q9UHD2	729 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	SOX13	Q9UN79	622 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	ARHGAP26	Q9UNA1	814 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	TTLL3	Q9Y4R7	772 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.17	□□□□□ -0.62
SND1-208	ENST00000470463	CPQ	Q9Y646	472 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	FAM169A	Q9Y6X4	670 aa		11.17	□□□□□ -0.62
SND1-208	ENST00000470463	ALPK3	Q96L96	1907 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	GOLGA6L7	A0A1B0GV03	622 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	E2F8	A0AVK6	867 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	TMEM120B	A0PK00	339 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463		H0Y626	953 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	PEX11B	O96011	259 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	MT-ND3	P03897	115 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	KLKB1	P03952	638 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	HLA-DQB2	P05538	268 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	CHN1	P15882	459 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	CA4	P22748	312 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	LSP1	P33241	339 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ADRA1A	P35348	466 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	AVPR1A	P37288	418 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	HADHA	P40939	763 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ERVFC1	P60507	584 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ERVK-21	P61565	698 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	IL9R	Q01113	521 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ITK	Q08881	620 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	SLC12A1	Q13621	1099 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	SEPT7	Q16181	437 aa	Known RBP	11.16	□□□□□ -0.62
SND1-208	ENST00000470463	MPPE1	Q53F39	396 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	INO80D	Q53TQ3	878 aa	Predicted RBP	11.16	□□□□□ -0.62
SND1-208	ENST00000470463	TJAP1	Q5JTD0	557 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	PDPK2P	Q6A1A2	396 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	TXNDC8	Q6A555	127 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	IL31	Q6EBC2	164 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	RANBP10	Q6VN20	620 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ARHGAP36	Q6ZRI8	547 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	GAREM2	Q75VX8	874 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	PPM1N	Q8N819	430 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	NETO2	Q8NC67	525 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ACMSD	Q8TDX5	336 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	USP33	Q8TEY7	942 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	DYDC1	Q8WWB3	177 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ARNTL2	Q8WYA1	636 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	PEX13	Q92968	403 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ZBTB9	Q96C00	473 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	OTUB2	Q96DC9	234 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.16	□□□□□ -0.62
SND1-208	ENST00000470463	RANBP9	Q96S59	729 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	CPNE1	Q99829	537 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	GORASP1	Q9BQQ3	440 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	KIFC1	Q9BW19	673 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	NSRP1	Q9H0G5	558 aa	Known RBP	11.16	□□□□□ -0.62
SND1-208	ENST00000470463	PDF	Q9HBH1	243 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ATP13A1	Q9HD20	1204 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ALG13	Q9NP73	1137 aa	Known RBP	11.16	□□□□□ -0.62
SND1-208	ENST00000470463	NT5M	Q9NPB1	228 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	KCNK9	Q9NPC2	374 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	GKN1	Q9NS71	199 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	SYBU	Q9NX95	663 aa		11.16	□□□□□ -0.62
SND1-208	ENST00000470463	ZFAT	Q9P243	1243 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms