RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SEMA3BQ13214 749 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 PDE1CQ14123 709 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 ANKRD20A4Q4UJ75 823 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 PLEKHG4Q58EX7 1191 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 CMPK2Q5EBM0 449 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 MAP3K21Q5TCX8 1036 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 OTUD1Q5VV17 481 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 BTBD8Q5XKL5 378 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 RWDD4Q6NW29 188 aaKnown RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 RAPH1Q70E73 1250 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 NET1Q7Z628 596 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 KCNMB4Q86W47 210 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 SPATA2LQ8IUW3 424 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 APLFQ8IW19 511 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 SCUBE1Q8IWY4 988 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 KIRREL3Q8IZU9 778 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 SIX5Q8N196 739 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 ARHGAP18Q8N392 663 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 ARRDC4Q8NCT1 418 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 UTP4Q969X6 686 aaKnown RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 MYLPFQ96A32 169 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 CMTM5Q96DZ9 223 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 AGAP3Q96P47 875 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 SMOQ99835 787 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 FAM167BQ9BTA0 163 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 FSD1LQ9BXM9 530 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 NMUR2Q9GZQ4 415 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 TKTL2Q9H0I9 626 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 UGT1A7Q9HAW7 530 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 UGT1A10Q9HAW8 530 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 UGT1A8Q9HAW9 530 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 KCNK13Q9HB14 408 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 FBXO6Q9NRD1 293 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 ENAMQ9NRM1 1142 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 SNX15Q9NRS6 342 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 C20orf96Q9NUD7 363 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 RNF19AQ9NV58 838 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 GEMIN8Q9NWZ8 242 aaKnown RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 FNIP2Q9P278 1114 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 MARCOQ9UEW3 520 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 OR12D3Q9UGF7 316 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 IPO11Q9UI26 975 aaKnown RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 ATXN7L1Q9ULK2 861 aaPredicted RBP8.14□□□□□ -1.11
SMC4-212ENST00000470240 DNAJC16Q9Y2G8 782 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 MFHAS1Q9Y4C4 1052 aa8.14□□□□□ -1.11
SMC4-212ENST00000470240 TSC2P49815 1807 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 A0A1W2PNR3 127 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 SERTM1A2A2V5 107 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 ARL5CA6NH57 179 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CASTOR2A6NHX0 329 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 F8W8V4 182 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 SLCO1B7G3V0H7 640 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 NRP1O14786 923 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 NVLO15381 856 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 BEST1O76090 585 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 B3GAT3O94766 335 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 PROCP04070 461 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 ALDOAP04075 364 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 CYP11A1P05108 521 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 ERVK-10P10266 1014 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 SLC2A3P11169 496 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 COL6A2P12110 1019 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 AOC1P19801 751 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 NFKB1P19838 968 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 TYMPP19971 482 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CCNCP24863 283 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 PRDX6P30041 224 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CCR1P32246 355 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 GRIA1P42261 906 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 NDUFV1P49821 464 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 SCNN1GP51170 649 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CLCNKBP51801 687 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 COPAP53621 1224 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 EPHA4P54764 986 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 SLC12A2P55011 1212 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 FCGRTP55899 365 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CRADDP78560 199 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 FOXK2Q01167 660 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 SREBF2Q12772 1141 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 TUSC3Q13454 348 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 THOC5Q13769 683 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 MBLAC2Q68D91 279 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 OVOS1Q6IE37 1185 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 LYPD4Q6UWN0 246 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 HFE2Q6ZVN8 426 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 PAQR9Q6ZVX9 377 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 MRPL10Q7Z7H8 261 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 TMEM135Q86UB9 458 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 TAC4Q86UU9 113 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 ALYREFQ86V81 257 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 NLRP8Q86W28 1048 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CCDC117Q8IWD4 279 aaPredicted RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 DCP1BQ8IZD4 617 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 RNF169Q8NCN4 708 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CALML6Q8TD86 181 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 NDRG1Q92597 394 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 LENG1Q96BZ8 264 aaPredicted RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 SCYL1Q96KG9 808 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 FAM161BQ96MY7 647 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms