RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 BRAFP15056 766 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 CHN1P15882 459 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 TPH1P17752 444 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 HOXD9P28356 352 aaPredicted RBP18.44■□□□□ 0.54
SMC4-211ENST00000469858 MAGEA10P43363 369 aaPredicted RBP18.44■□□□□ 0.54
SMC4-211ENST00000469858 SLC7A9P82251 487 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 CDH17Q12864 832 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 LBRQ14739 615 aaKnown RBP18.44■□□□□ 0.54
SMC4-211ENST00000469858 CRYMQ14894 314 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 TMCO4Q5TGY1 634 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 TTC39BQ5VTQ0 682 aaPredicted RBP18.44■□□□□ 0.54
SMC4-211ENST00000469858 LRRC6Q86X45 466 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 TEX26Q8N6G2 289 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 FSD1LQ9BXM9 530 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 PDFQ9HBH1 243 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 SMYD2Q9NRG4 433 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 SH3BP1Q9Y3L3 701 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 MYLKQ15746 1914 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.44■□□□□ 0.54
SMC4-211ENST00000469858 A6NNZ2 444 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 TBL1XO60907 577 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 TUBB8Q3ZCM7 444 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 CES3Q6UWW8 571 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 UNC5BQ8IZJ1 945 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 SLC46A2Q9BY10 475 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 SMG9Q9H0W8 520 aaKnown RBP18.44■□□□□ 0.54
SMC4-211ENST00000469858 KIF9Q9HAQ2 790 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 KCNK9Q9NPC2 374 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 PPANQ9NQ55 473 aaKnown RBP18.44■□□□□ 0.54
SMC4-211ENST00000469858 RPS6KL1Q9Y6S9 549 aa18.44■□□□□ 0.54
SMC4-211ENST00000469858 TMEM120BA0PK00 339 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 ILVBLA1L0T0 632 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 TYW5A2RUC4 315 aaKnown RBP18.43■□□□□ 0.54
SMC4-211ENST00000469858 POLBP06746 335 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 NPY2RP49146 381 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 DSC2Q02487 901 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 GPM6BQ13491 265 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 PCSK7Q16549 785 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 KDELC2Q7Z4H8 507 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 SETD3Q86TU7 594 aaPredicted RBP18.43■□□□□ 0.54
SMC4-211ENST00000469858 PGBD5Q8N414 524 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 HJURPQ8NCD3 748 aaPredicted RBP18.43■□□□□ 0.54
SMC4-211ENST00000469858 SHKBP1Q8TBC3 707 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 BHMTQ93088 406 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 TCEAL4Q96EI5 215 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 IMP4Q96G21 291 aaKnown RBP18.43■□□□□ 0.54
SMC4-211ENST00000469858 IL22Q9GZX6 179 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 CERS4Q9HA82 394 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 DNMT3BQ9UBC3 853 aaKnown RBP18.43■□□□□ 0.54
SMC4-211ENST00000469858 TBC1D30Q9Y2I9 924 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 ACTL7BQ9Y614 415 aa18.43■□□□□ 0.54
SMC4-211ENST00000469858 FAM159BA6NKW6 160 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 AP3B1O00203 1094 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 FAM155BO75949 473 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 C1RP00736 705 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 PTPN2P17706 415 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 GLDCP23378 1020 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 LSP1P33241 339 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 CD86P42081 329 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 OXCT1P55809 520 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 NIPAL4Q0D2K0 466 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 MPP3Q13368 585 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 ZNF235Q14590 738 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 GPR158Q5T848 1215 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 ZNF697Q5TEC3 545 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 CXorf57Q6NSI4 855 aaKnown RBP18.42■□□□□ 0.54
SMC4-211ENST00000469858 RTL10Q7L3V2 364 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 RBM23Q86U06 439 aaKnown RBP18.42■□□□□ 0.54
SMC4-211ENST00000469858 SLC26A11Q86WA9 606 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 CARNMT1Q8N4J0 409 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 TMA16Q96EY4 203 aaKnown RBP18.42■□□□□ 0.54
SMC4-211ENST00000469858 MRGPRX2Q96LB1 330 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 MUC3BQ9H195 1237 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 TRABDQ9H4I3 376 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 ATP13A1Q9HD20 1204 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 MOCS1Q9NZB8 636 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 YBX2Q9Y2T7 364 aaKnown RBP18.42■□□□□ 0.54
SMC4-211ENST00000469858 ACTL7AQ9Y615 435 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 NOTCH4Q99466 2003 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 ATG2AQ2TAZ0 1938 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 A0A1W2PPM1 405 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 TTC24A2A3L6 582 aaPredicted RBP18.42■□□□□ 0.54
SMC4-211ENST00000469858 H0Y626 953 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 UGT1A9O60656 530 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 ALDH1A2O94788 518 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 RHOP08100 348 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 ADRA1AP35348 466 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 EPHA5P54756 1037 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 SMAD1Q15797 465 aaKnown RBP18.42■□□□□ 0.54
SMC4-211ENST00000469858 RNF219Q5W0B1 726 aaPredicted RBP18.42■□□□□ 0.54
SMC4-211ENST00000469858 BBS7Q8IWZ6 715 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 C4orf33Q8N1A6 199 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 ZNF669Q96BR6 464 aaPredicted RBP18.42■□□□□ 0.54
SMC4-211ENST00000469858 SAMD11Q96NU1 681 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 UGT1A7Q9HAW7 530 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 UGT1A10Q9HAW8 530 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 UGT1A8Q9HAW9 530 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 SENP1Q9P0U3 644 aa18.42■□□□□ 0.54
SMC4-211ENST00000469858 IQANK1A0A1B0GTG1 560 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 LEFTY2O00292 366 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms