RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-210	ENST00000469565	SLC20A2	Q08357	652 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	AP1B1	Q10567	949 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	EOGT	Q5NDL2	527 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	BBS12	Q6ZW61	710 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	ZC3H18	Q86VM9	953 aa	Known RBP	13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	NSMCE1	Q8WV22	266 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	CLDN23	Q96B33	292 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	MRGPRX3	Q96LB0	322 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	C16orf45	Q96MC5	204 aa	Predicted RBP	13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	FAM118B	Q9BPY3	351 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	HERPUD2	Q9BSE4	406 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	CHRD	Q9H2X0	955 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	MTG2	Q9H4K7	406 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	SUN2	Q9UH99	717 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	EFR3B	Q9Y2G0	817 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	FCF1	Q9Y324	198 aa	Known RBP	13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	RAD54B	Q9Y620	910 aa		13.91	□□□□□ -0.18
LMNA-210	ENST00000469565	ANKRD36	A6QL64	1941 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	CKAP5	Q14008	2032 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.9	□□□□□ -0.18
LMNA-210	ENST00000469565		H7C0C1	242 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	SGK1	O00141	431 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	NPC1	O15118	1278 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	SMAD6	O43541	496 aa	Known RBP	13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	SYNCRIP	O60506	623 aa	Known RBP	13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	PRAMEF11	O60813	436 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	SRC	P12931	536 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	HOXB2	P14652	356 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	ATP5O	P48047	213 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	NR2C2	P49116	596 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	GALNT2	Q10471	571 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	MTAP	Q13126	283 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	GAS6	Q14393	721 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	PDK1	Q15118	436 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	DLG2	Q15700	870 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	HSF5	Q4G112	596 aa	Predicted RBP	13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	SYT10	Q6XYQ8	523 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	SH2D3C	Q8N5H7	860 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	GPR161	Q8N6U8	529 aa	Known RBP	13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	SUMF1	Q8NBK3	374 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	PBK	Q96KB5	322 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	OSBPL9	Q96SU4	736 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	SEPT10	Q9P0V9	454 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	MMP17	Q9ULZ9	603 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	WDR87	Q6ZQQ6	2873 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	CACNA1B	Q00975	2339 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	FANCM	Q8IYD8	2048 aa		13.9	□□□□□ -0.18
LMNA-210	ENST00000469565	TCRBV7S2A1N4T	A0A589	114 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	APOC4-APOC2	K7ER74	178 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	PPP1R12A	O14974	1030 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	MAFK	O60675	156 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	ADAM23	O75077	832 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	TMCC1	O94876	653 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	APOC2	P02655	101 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	FGG	P02679	453 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	VAV1	P15498	845 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	MAGEA9	P43362	315 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	SERPINH1	P50454	418 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	ETF1	P62495	437 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	OTUD4	Q01804	1114 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	IL10RB	Q08334	325 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	STARD3	Q14849	445 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	LONRF2	Q1L5Z9	754 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	TIGD7	Q6NT04	549 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	LRRC49	Q8IUZ0	686 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	CCDC13	Q8IYE1	715 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	RYBP	Q8N488	228 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	SPEM1	Q8N4L4	309 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	ACTL9	Q8TC94	416 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	MYO19	Q96H55	970 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	LGMN	Q99538	433 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	TM6SF2	Q9BZW4	377 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	TNKS2	Q9H2K2	1166 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	TMEM245	Q9H330	911 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	DLGAP2	Q9P1A6	1054 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	NCDN	Q9UBB6	729 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	SNX12	Q9UMY4	172 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	HS3ST2	Q9Y278	367 aa		13.89	□□□□□ -0.19
LMNA-210	ENST00000469565	MUC22	E2RYF6	1773 aa	Predicted RBP	13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	FRYL	O94915	3013 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	EDDM13	A0A1B0GTR0	161 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	CHURC1-FNTB	B4DL54	471 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	ZNF185	O15231	689 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	ZBTB24	O43167	697 aa	Predicted RBP	13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	ATP9B	O43861	1147 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	CD160	O95971	181 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	CHRM1	P11229	460 aa	Predicted RBP	13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	CCNC	P24863	283 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	RECQL	P46063	649 aa	Predicted RBP	13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	CXCL12	P48061	93 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	EIF3E	P60228	445 aa	Known RBP	13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	RHOA	P61586	193 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	SATB1	Q01826	763 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	LBR	Q14739	615 aa	Known RBP	13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	NOMO1	Q15155	1222 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	TMCO4	Q5TGY1	634 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	KIAA1211L	Q6NV74	962 aa		13.88	□□□□□ -0.19
LMNA-210	ENST00000469565	C22orf39	Q6P5X5	142 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms