RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FAM47CQ5HY64 1035 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 PPM1LQ5SGD2 360 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 LPCAT4Q643R3 524 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 FCRLBQ6BAA4 426 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 IQSEC1Q6DN90 963 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 ITPRIPL1Q6GPH6 555 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 ANKRD26P1Q6NSI1 321 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF544Q6NX49 715 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 FAM171BQ6P995 826 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 FBXL19Q6PCT2 694 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 IYDQ6PHW0 289 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 PLEKHG7Q6ZR37 379 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 USP43Q70EL4 1123 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 DGLUCYQ7Z3D6 616 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 SPRED2Q7Z698 418 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 TFAP2DQ7Z6R9 452 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 NLRP10Q86W26 655 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 GALNT13Q8IUC8 556 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 ARMC8Q8IUR7 673 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 ELMOD2Q8IZ81 293 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 CADM3Q8N126 398 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 POU5F2Q8N7G0 328 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 FAM169BQ8N8A8 192 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 MFSD2AQ8NA29 543 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 SLC4A11Q8NBS3 891 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 KIAA0895Q8NCT3 520 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 BLOC1S5Q8TDH9 187 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 LARP4BQ92615 738 aaKnown RBP4.94□□□□□ -1.62
SF3B1-207ENST00000468925 KRT35Q92764 455 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 STAMQ92783 540 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 ATP2A3Q93084 1043 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 VPS33AQ96AX1 596 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 REXO5Q96IC2 774 aaKnown RBP4.94□□□□□ -1.62
SF3B1-207ENST00000468925 WNK4Q96J92 1243 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 RPRD1AQ96P16 312 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-207ENST00000468925 FANCD2OSQ96PS1 177 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 VPS35Q96QK1 796 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 ALPK1Q96QP1 1244 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 DHRS4Q9BTZ2 278 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 RSRP1Q9BUV0 290 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 PACSIN1Q9BY11 444 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 NMUR2Q9GZQ4 415 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 MKRN2Q9H000 416 aaKnown RBP4.94□□□□□ -1.62
SF3B1-207ENST00000468925 RNF38Q9H0F5 515 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 ADAMTS10Q9H324 1103 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 RAD21L1Q9H4I0 556 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 RAVER2Q9HCJ3 691 aaKnown RBP4.94□□□□□ -1.62
SF3B1-207ENST00000468925 FBXO8Q9NRD0 319 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 DNAJC28Q9NX36 388 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 MOCS1Q9NZB8 636 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 PKD2L2Q9NZM6 624 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 TBK1Q9UHD2 729 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 IPO11Q9UI26 975 aaKnown RBP4.94□□□□□ -1.62
SF3B1-207ENST00000468925 CFL2Q9Y281 166 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 DRG1Q9Y295 367 aaKnown RBP4.94□□□□□ -1.62
SF3B1-207ENST00000468925 CAB39Q9Y376 341 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-207ENST00000468925 CSNK1G3Q9Y6M4 447 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 U3KQE9 123 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 TJP1Q07157 1748 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF804BA4D1E1 1349 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 CLUHO75153 1309 aa4.94□□□□□ -1.62
SF3B1-207ENST00000468925 TOPAZ1Q8N9V7 1692 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 WDR91A4D1P6 747 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SMCO2A6NFE2 343 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ZSCAN5BA6NJL1 495 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CENPXA8MT69 81 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 H3BMQ9 156 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TAF4O00268 1085 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PDXKO00764 312 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ZW10O43264 779 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TOM1O60784 492 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 H2AFYO75367 372 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 KATNA1O75449 491 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 DAB1O75553 588 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 LEFTY1O75610 366 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PLEKHA8P1O95397 391 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CCNE2O96020 404 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 APOA1P02647 267 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 SERPINB2P05120 415 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 IGKV5-2P06315 115 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 C6orf222P0C671 652 aaPredicted RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PLS3P13797 630 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CREB1P16220 341 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PRKCAP17252 672 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ITGAXP20702 1163 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 ABCB4P21439 1286 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TGM1P22735 817 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TCEA1P23193 301 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 MYF6P23409 242 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 GRK2P25098 689 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 IVDP26440 423 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CNTFP26441 200 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PON1P27169 355 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TYK2P29597 1187 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 POLR2BP30876 1174 aaKnown RBP4.93□□□□□ -1.62
SF3B1-207ENST00000468925 GUCY1A2P33402 732 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 TRIM23P36406 574 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 PIK3CAP42336 1068 aa4.93□□□□□ -1.62
SF3B1-207ENST00000468925 CBX5P45973 191 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms