RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CAPZA3Q96KX2 299 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 GABRG3Q99928 467 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 COL25A1Q9BXS0 654 aaPredicted RBP15.49■□□□□ 0.07
SNIP1-202ENST00000468040 CACNA2D2Q9NY47 1150 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 SEPT3Q9UH03 358 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 SLCO3A1Q9UIG8 710 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 R3HDM2Q9Y2K5 976 aaKnown RBP15.49■□□□□ 0.07
SNIP1-202ENST00000468040 VCANP13611 3396 aa15.49■□□□□ 0.07
SNIP1-202ENST00000468040 KRIT1O00522 736 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 LIASO43766 372 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 NEBLO76041 1014 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 URI1O94763 535 aaPredicted RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 TMCC1O94876 653 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 PEX11BO96011 259 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 CCNB1P14635 433 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 AOC1P19801 751 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 PRKCHP24723 683 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 CLCN5P51795 746 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 IFI35P80217 286 aaPredicted RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 TUBB2AQ13885 445 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 ZNF235Q14590 738 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 LBRQ14739 615 aaKnown RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 DLG2Q15700 870 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 HNRNPA1L2Q32P51 320 aaKnown RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 HEATR6Q6AI08 1181 aaKnown RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 C22orf39Q6P5X5 142 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 DRICH1Q6PGQ1 229 aaPredicted RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 DARS2Q6PI48 645 aaKnown RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 LEKR1Q6ZMV7 388 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 Q6ZS52 159 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 TEX26Q8N6G2 289 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 PCDH20Q8N6Y1 951 aaKnown RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 TXNDC5Q8NBS9 432 aaKnown RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 FRS2Q8WU20 508 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 C1orf54Q8WWF1 131 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 ATG4AQ8WYN0 398 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 NKD2Q969F2 451 aaPredicted RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 CCDC114Q96M63 670 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 ACOX2Q99424 681 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 FAM118BQ9BPY3 351 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 TUBB2BQ9BVA1 445 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 CINPQ9BW66 212 aaPredicted RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 CHRDQ9H2X0 955 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 SUN2Q9UH99 717 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 AMACRQ9UHK6 382 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 MMP17Q9ULZ9 603 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 FCF1Q9Y324 198 aaKnown RBP15.48■□□□□ 0.07
SNIP1-202ENST00000468040 ACTL7AQ9Y615 435 aa15.48■□□□□ 0.07
SNIP1-202ENST00000468040 EDDM13A0A1B0GTR0 161 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 BCLAF3A2AJT9 711 aaKnown RBP15.47■□□□□ 0.07
SNIP1-202ENST00000468040 TARSL2A2RTX5 802 aaKnown RBP15.47■□□□□ 0.07
SNIP1-202ENST00000468040 CFAP69A5D8W1 941 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 ANTXRLA6NF34 631 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 TTC34A8MYJ7 566 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 K7ERQ8 282 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 KCNK1O00180 336 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 SMAD6O43541 496 aaKnown RBP15.47■□□□□ 0.07
SNIP1-202ENST00000468040 SYNCRIPO60506 623 aaKnown RBP15.47■□□□□ 0.07
SNIP1-202ENST00000468040 STK10O94804 968 aaKnown RBP15.47■□□□□ 0.07
SNIP1-202ENST00000468040 PDGFBP01127 241 aaPredicted RBP15.47■□□□□ 0.07
SNIP1-202ENST00000468040 EPHX1P07099 455 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 HOXB2P14652 356 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 HSPA9P38646 679 aaKnown RBP15.47■□□□□ 0.07
SNIP1-202ENST00000468040 MMP13P45452 471 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 RECQLP46063 649 aaPredicted RBP15.47■□□□□ 0.07
SNIP1-202ENST00000468040 RHOAP61586 193 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 SLC10A7Q0GE19 358 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 BYSLQ13895 437 aaKnown RBP15.47■□□□□ 0.07
SNIP1-202ENST00000468040 STARD3Q14849 445 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 BMP8AQ7Z5Y6 402 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 PLPP6Q8IY26 295 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 PRELID2Q8N945 189 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 LRRN4Q8WUT4 740 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 HTR3CQ8WXA8 447 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 PBXIP1Q96AQ6 731 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 PSKH2Q96QS6 385 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 VAT1Q99536 393 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 AP1M1Q9BXS5 423 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 ZDHHC4Q9NPG8 344 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 DNPEPQ9ULA0 475 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 NCOR1O75376 2440 aa15.47■□□□□ 0.07
SNIP1-202ENST00000468040 TECTAO75443 2155 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 SGK1O00141 431 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 ADAM23O75077 832 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 GSRP00390 522 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 ITGAVP06756 1048 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 DCNP07585 359 aaKnown RBP15.46■□□□□ 0.07
SNIP1-202ENST00000468040 VAV1P15498 845 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 RBL1P28749 1068 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 SNRPD1P62314 119 aaKnown RBP15.46■□□□□ 0.07
SNIP1-202ENST00000468040 CKAP4Q07065 602 aaKnown RBP15.46■□□□□ 0.07
SNIP1-202ENST00000468040 CYTH1Q15438 398 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 OASLQ15646 514 aaKnown RBP15.46■□□□□ 0.07
SNIP1-202ENST00000468040 CYP1B1Q16678 543 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 Q6ZVU0 165 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 SYT13Q7L8C5 426 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 SPEM1Q8N4L4 309 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 C12orf50Q8NA57 414 aaPredicted RBP15.46■□□□□ 0.07
SNIP1-202ENST00000468040 GDAP1L1Q96MZ0 367 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 IL12RB2Q99665 862 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms