RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 GRIA1P42261 906 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 SGSHP51688 502 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 MAGOHP61326 146 aaKnown RBP9.61□□□□□ -0.87
PRPF3-202ENST00000467329 PPP2R2AP63151 447 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 USP4Q13107 963 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 HP1BP3Q5SSJ5 553 aaPredicted RBP9.61□□□□□ -0.87
PRPF3-202ENST00000467329 KCTD16Q68DU8 428 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 OTOP3Q7RTS5 596 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 ZNF557Q8N988 423 aaPredicted RBP9.61□□□□□ -0.87
PRPF3-202ENST00000467329 TMA16Q96EY4 203 aaKnown RBP9.61□□□□□ -0.87
PRPF3-202ENST00000467329 ZNF419Q96HQ0 510 aaPredicted RBP9.61□□□□□ -0.87
PRPF3-202ENST00000467329 NKX2-4Q9H2Z4 354 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 KIF9Q9HAQ2 790 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 PLAC1Q9HBJ0 212 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 ARNT2Q9HBZ2 717 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 ATP13A1Q9HD20 1204 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 HCFC1R1Q9NWW0 138 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 BCCIPQ9P287 314 aaKnown RBP eCLIP9.61□□□□□ -0.87
PRPF3-202ENST00000467329 UBA2Q9UBT2 640 aaPredicted RBP9.61□□□□□ -0.87
PRPF3-202ENST00000467329 ATG2AQ2TAZ0 1938 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 NUP205Q92621 2012 aa9.61□□□□□ -0.87
PRPF3-202ENST00000467329 FAM237BA0A1B0GVD1 139 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 FAM159BA6NKW6 160 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 TBL1XO60907 577 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 RFPL2O75678 378 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 ZXDBP98169 803 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SLC10A7Q0GE19 358 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 TEAD2Q15562 447 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 RALGPS1Q5JS13 557 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SYCP2LQ5T4T6 812 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 ADGRD1Q6QNK2 874 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 DCAF4L2Q8NA75 395 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 TDRD5Q8NAT2 981 aaKnown RBP9.6□□□□□ -0.87
PRPF3-202ENST00000467329 OR52K1Q8NGK4 314 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SLC44A1Q8WWI5 657 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 ARNTL2Q8WYA1 636 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 TTC17Q96AE7 1141 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 OTUB2Q96DC9 234 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 MGME1Q9BQP7 344 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 PBX4Q9BYU1 374 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 POLR1EQ9GZS1 481 aaKnown RBP9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SFXN1Q9H9B4 322 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 NT5MQ9NPB1 228 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 MOCS1Q9NZB8 636 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SAMD15Q9P1V8 674 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 HCFC2Q9Y5Z7 792 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 MAD1L1Q9Y6D9 718 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SRRM3A6NNA2 597 aaPredicted RBP9.6□□□□□ -0.87
PRPF3-202ENST00000467329 TSPAN3O60637 253 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 FAM155BO75949 473 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 BMP8BP34820 402 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 AVPR1AP37288 418 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 MSH2P43246 934 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SLCO1A2P46721 670 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SESN2P58004 480 aaPredicted RBP9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SLC12A1Q13621 1099 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SPARCL1Q14515 664 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 ZNF235Q14590 738 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 PPP2R2DQ66LE6 453 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 IL31Q6EBC2 164 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 ZNF354CQ86Y25 554 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 MPP5Q8N3R9 675 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 OR7D4Q8NG98 312 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 ARRDC2Q8TBH0 407 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SH3RF2Q8TEC5 729 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 DCAKDQ8WVC6 231 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 PABPC5Q96DU9 382 aaKnown RBP9.6□□□□□ -0.87
PRPF3-202ENST00000467329 PSKH2Q96QS6 385 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 RANBP9Q96S59 729 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 PAFAH2Q99487 392 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 TLE6Q9H808 572 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SSU72Q9NP77 194 aaKnown RBP9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SYBUQ9NX95 663 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 TBC1D14Q9P2M4 693 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 SOX13Q9UN79 622 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 OR51B4Q9Y5P0 310 aa9.6□□□□□ -0.87
PRPF3-202ENST00000467329 NUP210Q8TEM1 1887 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-202ENST00000467329 BRCA2P51587 3418 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 SMIM23A6NLE4 172 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 F5H423 210 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-202ENST00000467329 SHOX2O60902 331 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-202ENST00000467329 USP1O94782 785 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 EPOP01588 193 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 CYBBP04839 570 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 POLBP06746 335 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 PLK1P53350 603 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 KCNC3Q14003 757 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 ZNF77Q15935 545 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 FYB2Q5VWT5 728 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 RNF219Q5W0B1 726 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-202ENST00000467329 POTEHQ6S545 545 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 RANBP10Q6VN20 620 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 MARK2Q7KZI7 788 aaKnown RBP9.59□□□□□ -0.87
PRPF3-202ENST00000467329 METTL3Q86U44 580 aaKnown RBP9.59□□□□□ -0.87
PRPF3-202ENST00000467329 PRPF39Q86UA1 669 aaKnown RBP9.59□□□□□ -0.87
PRPF3-202ENST00000467329 BBS7Q8IWZ6 715 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 PPP2R3CQ969Q6 453 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 TCEAL4Q96EI5 215 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 FEM1CQ96JP0 617 aa9.59□□□□□ -0.87
PRPF3-202ENST00000467329 MRGPRX2Q96LB1 330 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms