RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 L1CAMP32004 1257 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 SOWAHAQ2M3V2 549 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 TRIM16LQ309B1 348 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 TTC39BQ5VTQ0 682 aaPredicted RBP18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 CATSPER4Q7RTX7 472 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 DPP9Q86TI2 863 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 TERB1Q8NA31 727 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 SLC35F5Q8WV83 523 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 TRUB1Q8WWH5 349 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 CTRCQ99895 268 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 CEP41Q9BYV8 373 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 CLK4Q9HAZ1 481 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 XAB2Q9HCS7 855 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 CARD8Q9Y2G2 431 aa18.36■□□□□ 0.53
SNAPC3-205ENST00000467062 A0A0G2JMZ2 1700 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 SCN1AP35498 2009 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 CFAP99D6REC4 459 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 APOL1O14791 398 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 GIPC1O14908 333 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 CAPN15O75808 1086 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 DGKIO75912 1065 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 METTL18O95568 372 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 MRPS22P82650 360 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 SLC6A3Q01959 620 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 TFDP2Q14188 446 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 ARCQ7LC44 396 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 MPP5Q8N3R9 675 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 ZNF420Q8TAQ5 688 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 OSBPL11Q9BXB4 747 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 CACNG4Q9UBN1 327 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 PRPF19Q9UMS4 504 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 TIMM22Q9Y584 194 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 JAK1P23458 1154 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 KPNA1P52294 538 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 YWHAZP63104 245 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 DMPKQ09013 629 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 KCNJ8Q15842 424 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 CES4AQ5XG92 561 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 CAND1Q86VP6 1230 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 PIWIL2Q8TC59 973 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 TFB1MQ8WVM0 346 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 BHMTQ93088 406 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 TDRD1Q9BXT4 1180 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 SLC13A1Q9BZW2 595 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 PLAC1Q9HBJ0 212 aa18.35■□□□□ 0.53
SNAPC3-205ENST00000467062 LRRC37A2A6NM11 1700 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 A0A087WXM4 84 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 TOP3BO95985 862 aaKnown RBP18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 FLOT2Q14254 428 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 CYP2A13Q16696 494 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 FRA10AC1Q70Z53 315 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 UNC5BQ8IZJ1 945 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 DLG3Q92796 817 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 TAMM41Q96BW9 452 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 SHCBP1LQ9BZQ2 653 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 SMYD2Q9NRG4 433 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 KRT37O76014 449 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 CYP2F1P24903 491 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 CRADDP78560 199 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 POU5F1BQ06416 359 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 PKDCCQ504Y2 493 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 TRMT10BQ6PF06 316 aaKnown RBP18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 XKR5Q6UX68 686 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 FRMD7Q6ZUT3 714 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 IFNLR1Q8IU57 520 aaPredicted RBP18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 SDR16C5Q8N3Y7 309 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 CCDC185Q8N715 623 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 KBTBD7Q8WVZ9 684 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 APBB2Q92870 758 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 CLIP3Q96DZ5 547 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 RTKNQ9BST9 563 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 FRMD8P1Q9BZ68 369 aaPredicted RBP18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 KATNBL1Q9H079 304 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 EHD1Q9H4M9 534 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 ZC3H7BQ9UGR2 993 aaKnown RBP18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 ERVK-11Q9UQG0 969 aa18.34■□□□□ 0.53
SNAPC3-205ENST00000467062 KRBA1A5PL33 1030 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 TRIM49D1C9J1S8 452 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 DYNC1LI2O43237 492 aaPredicted RBP18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 TTKP33981 857 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 EPHX2P34913 555 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 PITX1P78337 314 aaPredicted RBP18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 CD300CQ08708 224 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 BOLA3Q53S33 107 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 LGSNQ5TDP6 509 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 CARM1Q86X55 608 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 PTCD2Q8WV60 388 aaKnown RBP18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 PGLYRP2Q96PD5 576 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 PKP2Q99959 881 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 C20orf27Q9GZN8 174 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 SLC17A6Q9P2U8 582 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 LOC100653049A0A140TA62 436 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 KRT34O76011 436 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 ATE1O95260 518 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 BPGMP07738 259 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 MMP3P08254 477 aa18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 SNRPAP09012 282 aaKnown RBP18.33■□□□□ 0.52
SNAPC3-205ENST00000467062 GRM5P41594 1212 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms