RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CDKL3Q8IVW4 592 aaPredicted RBP15.47■□□□□ 0.07
NPHP4-205ENST00000466897 KMT2EQ8IZD2 1858 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 PCDH20Q8N6Y1 951 aaKnown RBP15.47■□□□□ 0.07
NPHP4-205ENST00000466897 C12orf50Q8NA57 414 aaPredicted RBP15.47■□□□□ 0.07
NPHP4-205ENST00000466897 ATP11CQ8NB49 1132 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 CCNYQ8ND76 341 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 KIF18AQ8NI77 898 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 FRS2Q8WU20 508 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 MS4A14Q96JA4 679 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 RPL10LQ96L21 214 aaKnown RBP15.47■□□□□ 0.07
NPHP4-205ENST00000466897 VAT1Q99536 393 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 RBM12Q9NTZ6 932 aaKnown RBP15.47■□□□□ 0.07
NPHP4-205ENST00000466897 HAUS2Q9NVX0 235 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 MMP17Q9ULZ9 603 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 R3HDM2Q9Y2K5 976 aaKnown RBP15.47■□□□□ 0.07
NPHP4-205ENST00000466897 STON1Q9Y6Q2 735 aa15.47■□□□□ 0.07
NPHP4-205ENST00000466897 GOLGA6L10A0A0M3HER8 536 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 TARSL2A2RTX5 802 aaKnown RBP15.46■□□□□ 0.07
NPHP4-205ENST00000466897 CFAP69A5D8W1 941 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 LIASO43766 372 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 TMCC1O94876 653 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 CCNB1P14635 433 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 PAFAH1B1P43034 410 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 SEC13P55735 322 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 LBRQ14739 615 aaKnown RBP15.46■□□□□ 0.07
NPHP4-205ENST00000466897 OASLQ15646 514 aaKnown RBP15.46■□□□□ 0.07
NPHP4-205ENST00000466897 C2orf27AQ580R0 203 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 EOGTQ5NDL2 527 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 EMC10Q5UCC4 262 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 MARC1Q5VT66 337 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 SDE2Q6IQ49 451 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 C22orf39Q6P5X5 142 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 SYT13Q7L8C5 426 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 ZC3H18Q86VM9 953 aaKnown RBP15.46■□□□□ 0.07
NPHP4-205ENST00000466897 CHPFQ8IZ52 775 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 BBS5Q8N3I7 341 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 RPLP0P6Q8NHW5 317 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 PSKH2Q96QS6 385 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 IL12RB2Q99665 862 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 FERMT1Q9BQL6 677 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 FBRSQ9HAH7 460 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 DLGAP2Q9P1A6 1054 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 SEPT3Q9UH03 358 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 SUN2Q9UH99 717 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 SLCO3A1Q9UIG8 710 aa15.46■□□□□ 0.07
NPHP4-205ENST00000466897 EDDM13A0A1B0GTR0 161 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 H7C0C1 242 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 STK25O00506 426 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 SMAD6O43541 496 aaKnown RBP15.45■□□□□ 0.06
NPHP4-205ENST00000466897 ADAM23O75077 832 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 ZNF821O75541 412 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-205ENST00000466897 KLF8O95600 359 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-205ENST00000466897 GSRP00390 522 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 ITGAVP06756 1048 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 VAV1P15498 845 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 PRKCHP24723 683 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 ATP5OP48047 213 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 NSUN2Q08J23 767 aaKnown RBP eCLIP15.45■□□□□ 0.06
NPHP4-205ENST00000466897 SLC10A7Q0GE19 358 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 AP1B1Q10567 949 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 CAMK2GQ13555 558 aaPredicted RBP15.45■□□□□ 0.06
NPHP4-205ENST00000466897 BYSLQ13895 437 aaKnown RBP15.45■□□□□ 0.06
NPHP4-205ENST00000466897 CYTH1Q15438 398 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 DLG2Q15700 870 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 RALGPS1Q5JS13 557 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 HEATR6Q6AI08 1181 aaKnown RBP15.45■□□□□ 0.06
NPHP4-205ENST00000466897 ALG1LQ6GMV1 187 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 Q6ZS52 159 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 SPEM1Q8N4L4 309 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 CCDC33Q8N5R6 958 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 ALLCQ8N6M5 410 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 PRELID2Q8N945 189 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 TXNDC5Q8NBS9 432 aaKnown RBP15.45■□□□□ 0.06
NPHP4-205ENST00000466897 FLCNQ8NFG4 579 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 HTR3CQ8WXA8 447 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 RTP4Q96DX8 246 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 CCDC114Q96M63 670 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 ACOX2Q99424 681 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 MGME1Q9BQP7 344 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 CACNA2D2Q9NY47 1150 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 CDC23Q9UJX2 597 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 DNPEPQ9ULA0 475 aa15.45■□□□□ 0.06
NPHP4-205ENST00000466897 DRG1Q9Y295 367 aaKnown RBP15.45■□□□□ 0.06
NPHP4-205ENST00000466897 ANTXRLA6NF34 631 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 TTC34A8MYJ7 566 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 K7ERQ8 282 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 KRIT1O00522 736 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 ALOX15BO15296 676 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 PAPSS2O95340 614 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-205ENST00000466897 PDGFBP01127 241 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-205ENST00000466897 STIP1P31948 543 aaKnown RBP15.44■□□□□ 0.06
NPHP4-205ENST00000466897 MMP13P45452 471 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 CSNK1DP48730 415 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 NUMBP49757 651 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 GAS6Q14393 721 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 DARS2Q6PI48 645 aaKnown RBP15.44■□□□□ 0.06
NPHP4-205ENST00000466897 ZNF572Q7Z3I7 529 aaPredicted RBP15.44■□□□□ 0.06
NPHP4-205ENST00000466897 ADAT2Q7Z6V5 191 aaKnown RBP15.44■□□□□ 0.06
NPHP4-205ENST00000466897 OR2AP1Q8NGE2 309 aa15.44■□□□□ 0.06
NPHP4-205ENST00000466897 ATG4AQ8WYN0 398 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms