RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MAIP1Q8WWC4 291 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 OSBPL9Q96SU4 736 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 CD248Q9HCU0 757 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 ZDHHC4Q9NPG8 344 aa16.3■□□□□ 0.2
GPC1-207ENST00000466624 TTC7AQ9ULT0 858 aaPredicted RBP16.3■□□□□ 0.2
GPC1-207ENST00000466624 A0A1W2PQF6 199 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 FAM86C2PA6NEL3 165 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 TTC34A8MYJ7 566 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 HACD1B0YJ81 288 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 WASH3PC4AMC7 463 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 MATN3O15232 486 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 SMAD6O43541 496 aaKnown RBP16.29■□□□□ 0.2
GPC1-207ENST00000466624 TMCC1O94876 653 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 AVPR2P30518 371 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 DGKEP52429 567 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 OTUD4Q01804 1114 aaKnown RBP16.29■□□□□ 0.2
GPC1-207ENST00000466624 CAMK2GQ13555 558 aaPredicted RBP16.29■□□□□ 0.2
GPC1-207ENST00000466624 HNRNPDQ14103 355 aaKnown RBP16.29■□□□□ 0.2
GPC1-207ENST00000466624 CCDC13Q8IYE1 715 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 ACTL9Q8TC94 416 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 MAML1Q92585 1016 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 PTPRN2Q92932 1015 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 CCDC114Q96M63 670 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 FRMD8P1Q9BZ68 369 aaPredicted RBP16.29■□□□□ 0.2
GPC1-207ENST00000466624 SAE1Q9UBE0 346 aaPredicted RBP16.29■□□□□ 0.2
GPC1-207ENST00000466624 AMACRQ9UHK6 382 aa16.29■□□□□ 0.2
GPC1-207ENST00000466624 K7ERQ8 282 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 ALOX15BO15296 676 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 MTSS1O43312 755 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 CEP104O60308 925 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 SYNCRIPO60506 623 aaKnown RBP16.28■□□□□ 0.2
GPC1-207ENST00000466624 ZNF821O75541 412 aaPredicted RBP16.28■□□□□ 0.2
GPC1-207ENST00000466624 MAP3K6O95382 1288 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 GSRP00390 522 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 HLA-EP13747 358 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 CXCR5P32302 372 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 HSPA9P38646 679 aaKnown RBP16.28■□□□□ 0.2
GPC1-207ENST00000466624 WASP42768 502 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 CXCL12P48061 93 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 LBRQ14739 615 aaKnown RBP16.28■□□□□ 0.2
GPC1-207ENST00000466624 PRKD1Q15139 912 aaPredicted RBP16.28■□□□□ 0.2
GPC1-207ENST00000466624 ACCSLQ4AC99 568 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 TMEM92Q6UXU6 159 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 ZSCAN30Q86W11 494 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 BBS5Q8N3I7 341 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 TEX26Q8N6G2 289 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 DTWD2Q8NBA8 298 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 CCNYQ8ND76 341 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 PSKH2Q96QS6 385 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 LGMNQ99538 433 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 POLMQ9NP87 494 aaPredicted RBP16.28■□□□□ 0.2
GPC1-207ENST00000466624 PRSS16Q9NQE7 514 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 PRMT8Q9NR22 394 aaPredicted RBP16.28■□□□□ 0.2
GPC1-207ENST00000466624 SEPT3Q9UH03 358 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 FCF1Q9Y324 198 aaKnown RBP16.28■□□□□ 0.2
GPC1-207ENST00000466624 ACTL7AQ9Y615 435 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 ZNF318Q5VUA4 2279 aa16.28■□□□□ 0.2
GPC1-207ENST00000466624 CACNA1IQ9P0X4 2223 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 KIF2AO00139 706 aaPredicted RBP16.27■□□□□ 0.2
GPC1-207ENST00000466624 DLL1O00548 723 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 MCF2LO15068 1137 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 FANCGO15287 622 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 FGGP02679 453 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 COL9A1P20849 921 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 RENBPP51606 427 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 RHOAP61586 193 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 IFI35P80217 286 aaPredicted RBP16.27■□□□□ 0.2
GPC1-207ENST00000466624 ELAVL3Q14576 367 aaKnown RBP16.27■□□□□ 0.2
GPC1-207ENST00000466624 CYTH1Q15438 398 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 C9orf64Q5T6V5 341 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 MARC1Q5VT66 337 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 LEKR1Q6ZMV7 388 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 CAMKK1Q8N5S9 505 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 OR2AP1Q8NGE2 309 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 OR2T3Q8NH03 318 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 ACTRT1Q8TDG2 376 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 TFB1MQ8WVM0 346 aaKnown RBP16.27■□□□□ 0.2
GPC1-207ENST00000466624 HAUS1Q96CS2 278 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 QKIQ96PU8 341 aaKnown RBP eCLIP16.27■□□□□ 0.2
GPC1-207ENST00000466624 NAP1L3Q99457 506 aaPredicted RBP16.27■□□□□ 0.2
GPC1-207ENST00000466624 CINPQ9BW66 212 aaPredicted RBP16.27■□□□□ 0.2
GPC1-207ENST00000466624 HAUS2Q9NVX0 235 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 SPATA6Q9NWH7 488 aaPredicted RBP16.27■□□□□ 0.2
GPC1-207ENST00000466624 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.2
GPC1-207ENST00000466624 ANKRD36A6QL64 1941 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 TCRBV7S2A1N4TA0A589 114 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 SIN3BO75182 1162 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 RBP3P10745 1247 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 CCNB1P14635 433 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 HOXA6P31267 233 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 CASQ1P31415 396 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 RECQLP46063 649 aaPredicted RBP16.26■□□□□ 0.19
GPC1-207ENST00000466624 CSNK1DP48730 415 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 EIF3EP60228 445 aaKnown RBP16.26■□□□□ 0.19
GPC1-207ENST00000466624 SNRPD1P62314 119 aaKnown RBP16.26■□□□□ 0.19
GPC1-207ENST00000466624 SATB1Q01826 763 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 NSUN2Q08J23 767 aaKnown RBP eCLIP16.26■□□□□ 0.19
GPC1-207ENST00000466624 SLC10A7Q0GE19 358 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 AP1B1Q10567 949 aa16.26■□□□□ 0.19
GPC1-207ENST00000466624 ZNF235Q14590 738 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms