RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ASCL5Q7RTU5 278 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 FAM124AQ86V42 546 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 LZTR1Q8N653 840 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 DEFB119Q8N690 84 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 CHST14Q8NCH0 376 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 OR2A12Q8NGT7 310 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 GANCQ8TET4 914 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
CHPF2-202ENST00000465601 ZNF670Q9BS34 389 aa12.62□□□□□ -0.39
CHPF2-202ENST00000465601 DUSP15Q9H1R2 295 aaPredicted RBP12.62□□□□□ -0.39
CHPF2-202ENST00000465601 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
CHPF2-202ENST00000465601 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 CXorf51AA0A1B0GTR3 108 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 MACROD2A1Z1Q3 448 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 PRR23AA6NEV1 266 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 C3orf70A6NLC5 250 aaPredicted RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 MID1O15344 667 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 PRAMEF11O60813 436 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 TMCC1O94876 653 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 IL1BP01584 269 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 KRT1P04264 644 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 C7P10643 843 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 SLC8A1P32418 973 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 RECQLP46063 649 aaPredicted RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 CCZ1BP86790 482 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 CCZ1P86791 482 aaPredicted RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 ZBTB16Q05516 673 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 CYTH1Q15438 398 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 CST6Q15828 149 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 POM121L1PQ3SYA9 428 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 ODF2Q5BJF6 829 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 CARD16Q5EG05 197 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 DPY19L3Q6ZPD9 716 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 C11orf74Q86VG3 221 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 TMEFF1Q8IYR6 380 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 TXLNBQ8N3L3 684 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 PCDH20Q8N6Y1 951 aaKnown RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 PQLC3Q8N755 202 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 KIAA1524Q8TCG1 905 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 FAF2Q96CS3 445 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 TOE1Q96GM8 510 aaKnown RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 ZC3H10Q96K80 434 aaKnown RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 CALR3Q96L12 384 aaKnown RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 CCDC114Q96M63 670 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 RNF157Q96PX1 679 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 TM6SF2Q9BZW4 377 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 CEP44Q9C0F1 390 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 PABPC3Q9H361 631 aaKnown RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 FBXL12Q9NXK8 326 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 DDX56Q9NY93 547 aaKnown RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 WSB2Q9NYS7 404 aaPredicted RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 UBA2Q9UBT2 640 aaPredicted RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 IPO11Q9UI26 975 aaKnown RBP12.61□□□□□ -0.39
CHPF2-202ENST00000465601 SARDHQ9UL12 918 aa12.61□□□□□ -0.39
CHPF2-202ENST00000465601 ANKRD36A6QL64 1941 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 CACNA1EQ15878 2313 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 A0A1W2PP55 124 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 GRID2IPA4D2P6 1211 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 PLK4O00444 970 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 PSTPIP1O43586 416 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 NDUFS2O75306 463 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 RHOBTB1O94844 696 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 CTSLP07711 333 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 CD6P30203 668 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 OXTRP30559 389 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 CHRNA3P32297 505 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 SERPINB6P35237 376 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 MARCKSL1P49006 195 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 METAP1P53582 386 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 RPL6Q02878 288 aaKnown RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 PAFAH1B3Q15102 231 aaKnown RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 LLGL1Q15334 1064 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 ELF2Q15723 593 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 TTC31Q49AM3 519 aaPredicted RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 INO80DQ53TQ3 878 aaPredicted RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 ARSIQ5FYB1 569 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 ATXN7L2Q5T6C5 722 aaPredicted RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 PMS2CLQ68D20 193 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 NCBP2-AS2Q69YL0 99 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 LAIR1Q6GTX8 287 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 MFSD7Q6UXD7 560 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 SLC36A4Q6YBV0 504 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 LPCAT2Q7L5N7 544 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 DSG4Q86SJ6 1040 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 RYBPQ8N488 228 aaPredicted RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 PIP4K2CQ8TBX8 421 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 ANP32BQ92688 251 aaKnown RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 KRT35Q92764 455 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 ISG20Q96AZ6 181 aaKnown RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 OMDQ99983 421 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 MAK16Q9BXY0 300 aaKnown RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 SP110Q9HB58 689 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 PDFQ9HBH1 243 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 HECAQ9UBI9 543 aaPredicted RBP12.6□□□□□ -0.39
CHPF2-202ENST00000465601 SERGEFQ9UGK8 458 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 PPM1HQ9ULR3 514 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 TRPM6Q9BX84 2022 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 CEP250Q9BV73 2442 aa12.6□□□□□ -0.39
CHPF2-202ENST00000465601 CABIN1Q9Y6J0 2220 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms