RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 FOXC1Q12948 553 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TEAD4Q15561 434 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 PIP5KL1Q5T9C9 394 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3GQ6DHY5 549 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3CQ6IPX1 549 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 PLEKHA7Q6IQ23 1121 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 DCUN1D2Q6PH85 259 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 IL27RAQ6UWB1 636 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 DPY19L3Q6ZPD9 716 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 NAXDQ8IW45 347 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TBC1D3Q8IZP1 549 aaPredicted RBP22.24■■□□□ 1.15
LIME1-203ENST00000465591 VCPIP1Q96JH7 1222 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 TRIM7Q9C029 511 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 NOL6Q9H6R4 1146 aaKnown RBP22.24■■□□□ 1.15
LIME1-203ENST00000465591 TM7SF3Q9NS93 570 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 FZD10Q9ULW2 581 aa22.24■■□□□ 1.15
LIME1-203ENST00000465591 SLC7A4O43246 635 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 L1CAMP32004 1257 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 CTSKP43235 329 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 RETSATQ6NUM9 610 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 TMC6Q7Z403 805 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 ARFGAP1Q8N6T3 406 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 GRIN3AQ8TCU5 1115 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 EDEM3Q9BZQ6 932 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 ARHGAP20Q9P2F6 1191 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 WASF2Q9Y6W5 498 aa22.23■■□□□ 1.15
LIME1-203ENST00000465591 A0A1W2PR77 199 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 ANKRD62A6NC57 917 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 H0Y8X5 98 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 KPNA3O00505 521 aaPredicted RBP22.22■■□□□ 1.15
LIME1-203ENST00000465591 VILLO15195 856 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 CBFA2T3O75081 653 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 FTLP02792 175 aaPredicted RBP22.22■■□□□ 1.15
LIME1-203ENST00000465591 ZNF883P0CG24 379 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 MAT2AP31153 395 aaKnown RBP22.22■■□□□ 1.15
LIME1-203ENST00000465591 KLHL30Q0D2K2 578 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 ZSCAN23Q3MJ62 389 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 ARSIQ5FYB1 569 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 FIGNQ5HY92 759 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 EFHC2Q5JST6 749 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 LEKR1Q6ZMV7 388 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 TMIEQ8NEW7 156 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 CEP44Q9C0F1 390 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 GPATCH2LQ9NWQ4 482 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 TRPM6Q9BX84 2022 aa22.22■■□□□ 1.15
LIME1-203ENST00000465591 EPHB2P29323 1055 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 SLC20A2Q08357 652 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 PRAMEF14Q5SWL7 426 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 HGSNATQ68CP4 663 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 DBX2Q6ZNG2 339 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 ADAT2Q7Z6V5 191 aaKnown RBP22.21■■□□□ 1.15
LIME1-203ENST00000465591 RTL3Q8N8U3 475 aaKnown RBP22.21■■□□□ 1.15
LIME1-203ENST00000465591 VOPP1Q96AW1 172 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 SERAC1Q96JX3 654 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 CCDC114Q96M63 670 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 PEBP4Q96S96 227 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 KLC2Q9H0B6 622 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 MAGEH1Q9H213 219 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 KDM4CQ9H3R0 1056 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 RETREG1Q9H6L5 497 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 AASDHPPTQ9NRN7 309 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 PARVAQ9NVD7 372 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 IL36AQ9UHA7 158 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 PCOLCE2Q9UKZ9 415 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 BTBD3Q9Y2F9 522 aa22.21■■□□□ 1.15
LIME1-203ENST00000465591 FARP1Q9Y4F1 1045 aaPredicted RBP22.21■■□□□ 1.15
LIME1-203ENST00000465591 CACNA1BQ00975 2339 aa22.2■■□□□ 1.15
LIME1-203ENST00000465591 TMEM191CA6NGB0 347 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 CREB3O43889 395 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 RAMP2O60895 175 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 LEFTY1O75610 366 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 GZMAP12544 262 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 PSMA2P25787 234 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 DNA2P51530 1060 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 CCNHP51946 323 aaPredicted RBP22.2■■□□□ 1.14
LIME1-203ENST00000465591 UBASH3AP57075 661 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 CA9Q16790 459 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 ZNF423Q2M1K9 1284 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 CARD16Q5EG05 197 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 PCDH20Q8N6Y1 951 aaKnown RBP22.2■■□□□ 1.14
LIME1-203ENST00000465591 TM6SF2Q9BZW4 377 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 CNOT8Q9UFF9 292 aaKnown RBP22.2■■□□□ 1.14
LIME1-203ENST00000465591 SPEGQ15772 3267 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 FRYQ5TBA9 3013 aa22.2■■□□□ 1.14
LIME1-203ENST00000465591 PRNPP04156 253 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 CD38P28907 300 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 GKP32189 559 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 ETFBP38117 255 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 RECQLP46063 649 aaPredicted RBP22.19■■□□□ 1.14
LIME1-203ENST00000465591 IL9RQ01113 521 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 POLD3Q15054 466 aaPredicted RBP22.19■■□□□ 1.14
LIME1-203ENST00000465591 TRIP6Q15654 476 aaKnown RBP22.19■■□□□ 1.14
LIME1-203ENST00000465591 PPP1R2P3Q6NXS1 205 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 CYP4V2Q6ZWL3 525 aaPredicted RBP22.19■■□□□ 1.14
LIME1-203ENST00000465591 TRIM69Q86WT6 500 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 NETO2Q8NC67 525 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 OR6K2Q8NGY2 324 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 SETD7Q8WTS6 366 aaKnown RBP22.19■■□□□ 1.14
LIME1-203ENST00000465591 ZNF653Q96CK0 615 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 CA5BQ9Y2D0 317 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms