RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PABPC3Q9H361 631 aaKnown RBP20.71■□□□□ 0.91
SKA3-205ENST00000465471 PPM1HQ9ULR3 514 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 CYP8B1Q9UNU6 501 aa20.71■□□□□ 0.91
SKA3-205ENST00000465471 ZFHX2Q9C0A1 2572 aaPredicted RBP20.7■□□□□ 0.9
SKA3-205ENST00000465471 GRID2IPA4D2P6 1211 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 J3KR12 359 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 RNASEH1O60930 286 aaKnown RBP20.7■□□□□ 0.9
SKA3-205ENST00000465471 TMCC1O94876 653 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 TAZQ16635 292 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 LEKR1Q6ZMV7 388 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 ARHGAP36Q6ZRI8 547 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 PRR23BQ6ZRT6 265 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 ASCL5Q7RTU5 278 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 ZNF354CQ86Y25 554 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 MMAAQ8IVH4 418 aaKnown RBP20.7■□□□□ 0.9
SKA3-205ENST00000465471 KATNAL2Q8IYT4 538 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 FAM131CQ96AQ9 280 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 VOPP1Q96AW1 172 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 FAM122AQ96E09 287 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 CCDC114Q96M63 670 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 RNF157Q96PX1 679 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 TNKS2Q9H2K2 1166 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 WSB2Q9NYS7 404 aaPredicted RBP20.7■□□□□ 0.9
SKA3-205ENST00000465471 FRYLO94915 3013 aa20.7■□□□□ 0.9
SKA3-205ENST00000465471 CEP192Q8TEP8 1941 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 THADAQ6YHU6 1953 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 DFFAO00273 331 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 MID1O15344 667 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 MFSD11O43934 449 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 ADH1BP00325 375 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 GSRP00390 522 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 DNTTP04053 509 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 KRT1P04264 644 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 CTSLP07711 333 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 ACADMP11310 421 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 CTNNA1P35221 906 aaKnown RBP20.69■□□□□ 0.9
SKA3-205ENST00000465471 MARCKSL1P49006 195 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 IL10RBQ08334 325 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 TTC31Q49AM3 519 aaPredicted RBP20.69■□□□□ 0.9
SKA3-205ENST00000465471 SPDYCQ5MJ68 293 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 LAIR1Q6GTX8 287 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 SLC36A4Q6YBV0 504 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 DPY19L3Q6ZPD9 716 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 ZNF662Q6ZS27 426 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 USP30Q70CQ3 517 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 DSG4Q86SJ6 1040 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 UBA2Q9UBT2 640 aaPredicted RBP20.69■□□□□ 0.9
SKA3-205ENST00000465471 SARDHQ9UL12 918 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 PIEZO1Q92508 2521 aa20.69■□□□□ 0.9
SKA3-205ENST00000465471 PEX11BO96011 259 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 C5AR1P21730 350 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 CD6P30203 668 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 OXTRP30559 389 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 PSMD8P48556 350 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 CYTH1Q15438 398 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 IFI16Q16666 785 aaKnown RBP20.68■□□□□ 0.9
SKA3-205ENST00000465471 CARD16Q5EG05 197 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 ZFYVE27Q5T4F4 411 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 SLC9A4Q6AI14 798 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 AADATQ8N5Z0 425 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 PLD5Q8N7P1 536 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 CHST14Q8NCH0 376 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 TMIEQ8NEW7 156 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 KIAA1524Q8TCG1 905 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 KRT35Q92764 455 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 LOXL4Q96JB6 756 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 TSGA10Q9BZW7 698 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 LHX3Q9UBR4 397 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 SERGEFQ9UGK8 458 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 IPO11Q9UI26 975 aaKnown RBP20.68■□□□□ 0.9
SKA3-205ENST00000465471 WASF2Q9Y6W5 498 aa20.68■□□□□ 0.9
SKA3-205ENST00000465471 WDR87Q6ZQQ6 2873 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 MACROD2A1Z1Q3 448 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 MAFKO60675 156 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 RHOBTB1O94844 696 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 TNNT1P13805 278 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 CTNNA2P26232 953 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 CHRNA3P32297 505 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 SLC8A1P32418 973 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 DRD3P35462 400 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 CDKN2BP42772 138 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 CCNHP51946 323 aaPredicted RBP20.67■□□□□ 0.9
SKA3-205ENST00000465471 METAP1P53582 386 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 NAP1L1P55209 391 aaKnown RBP20.67■□□□□ 0.9
SKA3-205ENST00000465471 GALNT2Q10471 571 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 GSE1Q14687 1217 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 NUMA1Q14980 2115 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 ELF2Q15723 593 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 LPAL2Q16609 132 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 MFSD7Q6UXD7 560 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 LRRC49Q8IUZ0 686 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 RNF10Q8N5U6 811 aaKnown RBP20.67■□□□□ 0.9
SKA3-205ENST00000465471 OR2AP1Q8NGE2 309 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 PIP4K2CQ8TBX8 421 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 TOE1Q96GM8 510 aaKnown RBP20.67■□□□□ 0.9
SKA3-205ENST00000465471 ZNF599Q96NL3 588 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 TM6SF2Q9BZW4 377 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 SP110Q9HB58 689 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 RAB23Q9ULC3 237 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 FZD4Q9ULV1 537 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms