RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TNKS2Q9H2K2 1166 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 PREBQ9HCU5 417 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 SEPT11Q9NVA2 429 aaKnown RBP19.36■□□□□ 0.69
VARS-220ENST00000461874 DMTF1Q9Y222 760 aa19.36■□□□□ 0.69
VARS-220ENST00000461874 NYNRINQ9P2P1 1898 aaKnown RBP19.35■□□□□ 0.69
VARS-220ENST00000461874 TCRBV5S1A1TA0A578 114 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 TMEM8BA6NDV4 472 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 TLR4O00206 839 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 KPNA3O00505 521 aaPredicted RBP19.35■□□□□ 0.69
VARS-220ENST00000461874 TEX33O43247 280 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 PLEKP08567 350 aaPredicted RBP19.35■□□□□ 0.69
VARS-220ENST00000461874 ATXN1LP0C7T5 689 aaKnown RBP19.35■□□□□ 0.69
VARS-220ENST00000461874 FERP16591 822 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 RHOQP17081 205 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 GPD1P21695 349 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 MAT2AP31153 395 aaKnown RBP19.35■□□□□ 0.69
VARS-220ENST00000461874 RECQLP46063 649 aaPredicted RBP19.35■□□□□ 0.69
VARS-220ENST00000461874 MAPKAPK2P49137 400 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 SERPINH1P50454 418 aaKnown RBP19.35■□□□□ 0.69
VARS-220ENST00000461874 ARF5P84085 180 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 IL9RQ01113 521 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 CCDC15Q0P6D6 951 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 SLC45A4Q5BKX6 768 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 RWDD4Q6NW29 188 aaKnown RBP19.35■□□□□ 0.69
VARS-220ENST00000461874 DPY19L3Q6ZPD9 716 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 CCDC185Q8N715 623 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 MFSD2AQ8NA29 543 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 NTAN1Q96AB6 310 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 ARRDC3Q96B67 414 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 BPIFA3Q9BQP9 254 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 GDF3Q9NR23 364 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 NDFIP2Q9NV92 336 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 TOR4AQ9NXH8 423 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 IL36AQ9UHA7 158 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 PLXNA2O75051 1894 aa19.35■□□□□ 0.69
VARS-220ENST00000461874 DOCK4Q8N1I0 1966 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 CXorf51AA0A1B0GTR3 108 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 RNF103O00237 685 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 LRIG2O94898 1065 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 DKK1O94907 266 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 CCDC172P0C7W6 258 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 ACVRL1P37023 503 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 ETFBP38117 255 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 NXPH1P58417 271 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 SCAPQ12770 1279 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 SHBQ15464 509 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 SETMARQ53H47 684 aaPredicted RBP19.34■□□□□ 0.69
VARS-220ENST00000461874 ARSIQ5FYB1 569 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 IRF2BP2Q7Z5L9 587 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 PCDH20Q8N6Y1 951 aaKnown RBP19.34■□□□□ 0.69
VARS-220ENST00000461874 HDAC8Q9BY41 377 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 RTN4Q9NQC3 1192 aaKnown RBP19.34■□□□□ 0.69
VARS-220ENST00000461874 TMEM248Q9NWD8 314 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 NEU3Q9UQ49 428 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 WASF2Q9Y6W5 498 aa19.34■□□□□ 0.69
VARS-220ENST00000461874 TNFSF14O43557 240 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 RNGTTO60942 597 aaKnown RBP19.33■□□□□ 0.68
VARS-220ENST00000461874 LEFTY1O75610 366 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 CD160O95971 181 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 ZNF143P52747 638 aaPredicted RBP19.33■□□□□ 0.68
VARS-220ENST00000461874 INAVAQ3KP66 663 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 ACAD10Q6JQN1 1059 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 NEK5Q6P3R8 708 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 DNAJC24Q6P3W2 148 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 ERN2Q76MJ5 926 aaKnown RBP19.33■□□□□ 0.68
VARS-220ENST00000461874 IQCHQ86VS3 1027 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 GRIN3AQ8TCU5 1115 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 BAP1Q92560 729 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 ARHGEF2Q92974 986 aaKnown RBP19.33■□□□□ 0.68
VARS-220ENST00000461874 TBC1D31Q96DN5 1066 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 ERVMER34-1Q9H9K5 563 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 DYRK4Q9NR20 520 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 DNAI1Q9UI46 699 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 ZMIZ1Q9ULJ6 1067 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 MYO6Q9UM54 1294 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 FCF1Q9Y324 198 aaKnown RBP19.33■□□□□ 0.68
VARS-220ENST00000461874 ACTL7AQ9Y615 435 aa19.33■□□□□ 0.68
VARS-220ENST00000461874 A0A1W2PQU0 124 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 SMTNL1A8MU46 457 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 PRAMEF26H0Y7S4 382 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 YKT6O15498 198 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 RXRGP48443 463 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 DNA2P51530 1060 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 RPL7AP62424 266 aaKnown RBP19.32■□□□□ 0.68
VARS-220ENST00000461874 OVGP1Q12889 678 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 STAT4Q14765 748 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 CARD16Q5EG05 197 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 PPP1R15BQ5SWA1 713 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 SLFN11Q7Z7L1 901 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 SPATS2Q86XZ4 545 aaKnown RBP19.32■□□□□ 0.68
VARS-220ENST00000461874 GATAD2AQ86YP4 633 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 MCOLN2Q8IZK6 566 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 SAP25Q8TEE9 199 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 MCEEQ96PE7 176 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 HEPHQ9BQS7 1158 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 SYT11Q9BT88 431 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 MAGEH1Q9H213 219 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 TMEM131Q92545 1883 aa19.32■□□□□ 0.68
VARS-220ENST00000461874 ANKRD62A6NC57 917 aa19.31■□□□□ 0.68
VARS-220ENST00000461874 CCP110O43303 1012 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms