RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KCNJ2P63252 427 aa20.55■□□□□ 0.88
CCM2-203ENST00000461377 FASTKD1Q53R41 847 aaKnown RBP20.55■□□□□ 0.88
CCM2-203ENST00000461377 RANBP10Q6VN20 620 aa20.55■□□□□ 0.88
CCM2-203ENST00000461377 FBXO22Q8NEZ5 403 aa20.55■□□□□ 0.88
CCM2-203ENST00000461377 PTCD2Q8WV60 388 aaKnown RBP20.55■□□□□ 0.88
CCM2-203ENST00000461377 UBE2OQ9C0C9 1292 aaKnown RBP20.55■□□□□ 0.88
CCM2-203ENST00000461377 SLC25A51Q9H1U9 297 aa20.55■□□□□ 0.88
CCM2-203ENST00000461377 CCSER2Q9H7U1 834 aa20.55■□□□□ 0.88
CCM2-203ENST00000461377 MRM3Q9HC36 420 aaKnown RBP20.55■□□□□ 0.88
CCM2-203ENST00000461377 MTRRQ9UBK8 725 aa20.55■□□□□ 0.88
CCM2-203ENST00000461377 ZFP69BQ9UJL9 534 aa20.55■□□□□ 0.88
CCM2-203ENST00000461377 FNDC1Q4ZHG4 1894 aaPredicted RBP20.54■□□□□ 0.88
CCM2-203ENST00000461377 ADAM12O43184 909 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 TIMM44O43615 452 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 PMPCBO75439 489 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 PARNO95453 639 aaKnown RBP20.54■□□□□ 0.88
CCM2-203ENST00000461377 MYCP01106 439 aaPredicted RBP20.54■□□□□ 0.88
CCM2-203ENST00000461377 RENBPP51606 427 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 IRX4P78413 519 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 SLC20A2Q08357 652 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 SLC8B1Q6J4K2 584 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 POTEHQ6S545 545 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 KDELC1Q6UW63 502 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 ANKRD33Q7Z3H0 272 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 CMC1Q7Z7K0 106 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 MTDHQ86UE4 582 aaKnown RBP20.54■□□□□ 0.88
CCM2-203ENST00000461377 TCAF1Q9Y4C2 921 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 NUMBLQ9Y6R0 609 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 SCN5AQ14524 2016 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 GREB1Q4ZG55 1949 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 J3KR12 359 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 TLR5O60602 858 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 F7P08709 466 aaPredicted RBP20.54■□□□□ 0.88
CCM2-203ENST00000461377 KPNA1P52294 538 aaPredicted RBP20.54■□□□□ 0.88
CCM2-203ENST00000461377 TNK2Q07912 1038 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 STX3Q13277 289 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 POU6F1Q14863 301 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 TAF1BQ53T94 588 aaPredicted RBP20.54■□□□□ 0.88
CCM2-203ENST00000461377 MBLAC2Q68D91 279 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 PPHLN1Q8NEY8 458 aaKnown RBP20.54■□□□□ 0.88
CCM2-203ENST00000461377 ATXN7L3BQ96GX2 97 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 CEP295NLQ96MC4 621 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 FSD1LQ9BXM9 530 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 TMEM216Q9P0N5 145 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 TRIM33Q9UPN9 1127 aa20.54■□□□□ 0.88
CCM2-203ENST00000461377 MGRN1O60291 552 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 DNAJC6O75061 913 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 MPOP05164 745 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 T-ENOLP0DO92 83 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 CDK18Q07002 472 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 MTA1Q13330 715 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 PCLAFQ15004 111 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 NADSYN1Q6IA69 706 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 CLNKQ7Z7G1 428 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 CNTN4Q8IWV2 1026 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 RNF168Q8IYW5 571 aaPredicted RBP20.53■□□□□ 0.88
CCM2-203ENST00000461377 KIF2BQ8N4N8 673 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 TEX26Q8N6G2 289 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 SKA1Q96BD8 255 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 IMP4Q96G21 291 aaKnown RBP20.53■□□□□ 0.88
CCM2-203ENST00000461377 PPP1R12CQ9BZL4 782 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 SP110Q9HB58 689 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 HEY2Q9UBP5 337 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 HBS1LQ9Y450 684 aaKnown RBP20.53■□□□□ 0.88
CCM2-203ENST00000461377 BACE2Q9Y5Z0 518 aa20.53■□□□□ 0.88
CCM2-203ENST00000461377 FGF3P11487 239 aaPredicted RBP20.52■□□□□ 0.88
CCM2-203ENST00000461377 ATN1P54259 1190 aaPredicted RBP20.52■□□□□ 0.88
CCM2-203ENST00000461377 WNT3AP56704 352 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 SLC10A7Q0GE19 358 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 USP41Q3LFD5 358 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 MARC1Q5VT66 337 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.52■□□□□ 0.88
CCM2-203ENST00000461377 CCDC91Q7Z6B0 441 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 PARP9Q8IXQ6 854 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 VPS39Q96JC1 886 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 RPRD1AQ96P16 312 aaPredicted RBP20.52■□□□□ 0.88
CCM2-203ENST00000461377 VN1R3Q9BXE9 311 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 C20orf27Q9GZN8 174 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 LRMDAQ9H2I8 198 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 ZNF395Q9H8N7 513 aaPredicted RBP20.52■□□□□ 0.88
CCM2-203ENST00000461377 ATP13A1Q9HD20 1204 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 NT5MQ9NPB1 228 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 THAP1Q9NVV9 213 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 KCNK4Q9NYG8 393 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 DOCK4Q8N1I0 1966 aa20.52■□□□□ 0.88
CCM2-203ENST00000461377 CCDC78A2IDD5 438 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 GOLGA8TH3BQL2 631 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 MYL2P10916 166 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 TARSP26639 723 aaKnown RBP20.52■□□□□ 0.87
CCM2-203ENST00000461377 HADHAP40939 763 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 ABCG1P45844 678 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 ALDH7A1P49419 539 aaKnown RBP20.52■□□□□ 0.87
CCM2-203ENST00000461377 CSRP3P50461 194 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 CTC1Q2NKJ3 1217 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 CCDC153Q494R4 210 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 ARMC3Q5W041 872 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 ZCCHC23Q6ZST2 131 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 DEFB128Q7Z7B8 93 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 CLEC14AQ86T13 490 aa20.52■□□□□ 0.87
CCM2-203ENST00000461377 CIR1Q86X95 450 aaPredicted RBP20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms