RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 LMLNQ96KR4 655 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 OLFM3Q96PB7 478 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 POLR1EQ9GZS1 481 aaKnown RBP11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 THAP10Q9P2Z0 257 aaPredicted RBP11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 CDC23Q9UJX2 597 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 ZNF148Q9UQR1 794 aa11.23□□□□□ -0.61
SMNDC1-203ENST00000460483 BCLAF3A2AJT9 711 aaKnown RBP11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 KRBA1A5PL33 1030 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 CHURC1-FNTBB4DL54 471 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 ALOX15BO15296 676 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 ATP9BO43861 1147 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 MAFKO60675 156 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 ITGAVP06756 1048 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 CHRNA3P32297 505 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 ACVRL1P37023 503 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 MMP13P45452 471 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 IRAK1P51617 712 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 DGKEP52429 567 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 RHOAP61586 193 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 LBRQ14739 615 aaKnown RBP11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 HNRNPA1L2Q32P51 320 aaKnown RBP11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 CFAP58Q5T655 872 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 DCAF12L1Q5VU92 463 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 FAM46CQ5VWP2 391 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 FSTL4Q6MZW2 842 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 TXNDC11Q6PKC3 985 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 BMP8AQ7Z5Y6 402 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 ZC3H18Q86VM9 953 aaKnown RBP11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 ARHGAP12Q8IWW6 846 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 APCDD1Q8J025 514 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 NDUFAF2Q8N183 169 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 SH2D3CQ8N5H7 860 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 NPWQ8N729 165 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 PAF1Q8N7H5 531 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 CCDC89Q8N998 374 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 ATL2Q8NHH9 583 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 HTR3CQ8WXA8 447 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 OR8D1Q8WZ84 308 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 NKD2Q969F2 451 aaPredicted RBP11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 MAGOHBQ96A72 148 aaKnown RBP11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 PPP1R16AQ96I34 528 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 GDAP1L1Q96MZ0 367 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 NECAB3Q96P71 396 aaPredicted RBP11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 PSKH2Q96QS6 385 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 OSBPL1AQ9BXW6 950 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 KLC2Q9H0B6 622 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 CD320Q9NPF0 282 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 NDFIP2Q9NV92 336 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 ETNK2Q9NVF9 386 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 CLEC4EQ9ULY5 219 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 SCML1Q9UN30 329 aa11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 DRG1Q9Y295 367 aaKnown RBP11.22□□□□□ -0.61
SMNDC1-203ENST00000460483 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 TMEM221A6NGB7 291 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 PRRT4C9JH25 899 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 C1QTNF3-AMACRE9PGA6 284 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 K7EQS6 105 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 M0R296 226 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 OPHN1O60890 802 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 RNF40O75150 1001 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 POP4O95707 220 aaKnown RBP11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 GSRP00390 522 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 EGFP01133 1207 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 PRNPP04156 253 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 EPHX1P07099 455 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 CHRNB1P11230 501 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 CSNK1DP48730 415 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 FNTAP49354 379 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 CCR3P51677 355 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 AP1S1P61966 158 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 IFI35P80217 286 aaPredicted RBP11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 ZBTB16Q05516 673 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 ITKQ08881 620 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 ELAVL3Q14576 367 aaKnown RBP11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 ZNF234Q14588 700 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 LLGL1Q15334 1064 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 DLG2Q15700 870 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 P3H1Q32P28 736 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 C2orf27AQ580R0 203 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 SYDE1Q6ZW31 735 aaPredicted RBP11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 SYT13Q7L8C5 426 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 MAATS1Q7Z4T9 603 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 CCDC105Q8IYK2 499 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 CAMKK1Q8N5S9 505 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 CEP112Q8N8E3 955 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 OR2AP1Q8NGE2 309 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 WFDC5Q8TCV5 224 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 USP33Q8TEY7 942 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 PBXIP1Q96AQ6 731 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 CLDN23Q96B33 292 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 QKIQ96PU8 341 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 C1QTNF1Q9BXJ1 281 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 NOL6Q9H6R4 1146 aaKnown RBP11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 DYRK4Q9NR20 520 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 RBM22Q9NW64 420 aaKnown RBP eCLIP11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 INTS6Q9UL03 887 aaKnown RBP11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 STON1Q9Y6Q2 735 aa11.21□□□□□ -0.61
SMNDC1-203ENST00000460483 ANAPC1Q9H1A4 1944 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms