RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 OTUD1Q5VV17 481 aaPredicted RBP3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 DCAF12L2Q5VW00 463 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 HEPHL1Q6MZM0 1159 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 TMEM71Q6P5X7 295 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 Q6ZTK2 550 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 SERPINA11Q86U17 422 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 TMC8Q8IU68 726 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 RNFT2Q96EX2 444 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 LYZL4Q96KX0 146 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 ZSCAN31Q96LW9 406 aaPredicted RBP3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 CTDSP1Q9GZU7 261 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 KLHL31Q9H511 634 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 MRPL44Q9H9J2 332 aaKnown RBP3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 TLR8Q9NR97 1041 aaKnown RBP3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 PLK2Q9NYY3 685 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 NCKIPSDQ9NZQ3 722 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 PLEKHB1Q9UF11 243 aaPredicted RBP3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 GDAQ9Y2T3 454 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 CLDN16Q9Y5I7 305 aa3.23□□□□□ -1.89
SCARNA18-201ENST00000459004 VWA3AA6NCI4 1184 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 SPRY3O43610 288 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 TSPAN3O60637 253 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 IL1AP01583 271 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 CPA1P15085 419 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 YWHAQP27348 245 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 HOXD3P31249 432 aaPredicted RBP3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 ARRB2P32121 409 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 RFC1P35251 1148 aaPredicted RBP3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 MLH1P40692 756 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 DPP6P42658 865 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 CDKN2AP42771 156 aaKnown RBP3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 PPP3CCP48454 512 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 CCT5P48643 541 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 HTR6P50406 440 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 SLC12A1Q13621 1099 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 GPR18Q14330 331 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 SH2D4BQ5SQS7 431 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 PDXDC1Q6P996 788 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 TRIM74Q86UV6 250 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 TRIM73Q86UV7 250 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 ANKRD18AQ8IVF6 992 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 CADM3Q8N126 398 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 HORMAD2Q8N7B1 307 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 SETD9Q8NE22 299 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 B4GALNT2Q8NHY0 566 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 CEP76Q8TAP6 659 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 MARK4Q96L34 752 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 TWNKQ96RR1 684 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 REEP2Q9BRK0 252 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 NTPCRQ9BSD7 190 aaKnown RBP3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 POLDIP3Q9BY77 421 aaKnown RBP3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 CATSPERBQ9H7T0 1116 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 TTC12Q9H892 705 aaPredicted RBP3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 ATP8A2Q9NTI2 1148 aa3.22□□□□□ -1.89
SCARNA18-201ENST00000459004 A0A096LPK6 155 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 SH2D7A6NKC9 451 aaPredicted RBP3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 OR6C75A6NL08 312 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 BECN2A8MW95 431 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 FAM157AC9JC47 383 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 MS4A18H0YCH9 400 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 SMAD6O43541 496 aaKnown RBP3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 SERPINC1P01008 464 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 LCATP04180 440 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 MMP3P08254 477 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 HOXC6P09630 235 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 WEE2P0C1S8 567 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 ITGB6P18564 788 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 CCKARP32238 428 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 GPR12P47775 334 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 CDH12P55289 794 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 TMPRSS3P57727 454 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 TBL3Q12788 808 aaKnown RBP3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 TRAF1Q13077 416 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 DHX8Q14562 1220 aaKnown RBP3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 RPE65Q16518 533 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 SLC18A3Q16572 532 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 DNTTIP2Q5QJE6 756 aaKnown RBP3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 FNBP1LQ5T0N5 605 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 MAP3K21Q5TCX8 1036 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 TBC1D9BQ66K14 1250 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 NCAPH2Q6IBW4 605 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 NAPEPLDQ6IQ20 393 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 BBS12Q6ZW61 710 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 ZNF367Q7RTV3 350 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 GHDCQ8N2G8 530 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 TMEM163Q8TC26 289 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 SLC35F5Q8WV83 523 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 OIT3Q8WWZ8 545 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 GCC1Q96CN9 775 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 NAF1Q96HR8 494 aaKnown RBP3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 SCLT1Q96NL6 688 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 GFM1Q96RP9 751 aaKnown RBP3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 TMEM204Q9BSN7 226 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 TAOK3Q9H2K8 898 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 CXorf56Q9H5V9 222 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 STN1Q9H668 368 aaKnown RBP3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 RIC8AQ9NPQ8 531 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 NLKQ9UBE8 527 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 IL36RNQ9UBH0 155 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms