RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 SURF1Q15526 300 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CCDC142Q17RM4 750 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 DCAF6Q58WW2 860 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 BMP2KLQ5H9B9 411 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 MANEAQ5SRI9 462 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 RNF187Q5TA31 235 aaPredicted RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 NCEH1Q6PIU2 408 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 DTHD1Q6ZMT9 781 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ABI3BPQ7Z7G0 1075 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PRPF39Q86UA1 669 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ADIPOR2Q86V24 386 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 OR6B3Q8NGW1 331 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 C9orf43Q8TAL5 461 aaPredicted RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 MAPK15Q8TD08 544 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 EPS8L3Q8TE67 593 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ATXN7L3BQ96GX2 97 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 JAKMIP1Q96N16 626 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SLC38A3Q99624 504 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 BOCQ9BWV1 1114 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 RAB34Q9BZG1 259 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 DMAP1Q9NPF5 467 aaPredicted RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TLR8Q9NR97 1041 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 DDX19AQ9NUU7 478 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 DONSONQ9NYP3 566 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CYTH4Q9UIA0 394 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 AGAP1Q9UPQ3 857 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 NME7Q9Y5B8 376 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PCDHGA3Q9Y5H0 932 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ABCA2Q9BZC7 2435 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 KNL1Q8NG31 2342 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ICE1Q9Y2F5 2266 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 FBN2P35556 2912 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SCN1AP35498 2009 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SPTBN1Q01082 2364 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 K7ESM1 405 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CREB3O43889 395 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ATP2C2O75185 946 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 LDHAP00338 332 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 KLKB1P03952 638 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 FDPSP14324 419 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PTPN1P18031 435 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 WT1P19544 449 aaPredicted RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TGM2P21980 687 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 GARTP22102 1010 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 LMO2P25791 158 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 UGT1A5P35504 534 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SLC5A3P53794 718 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CACNA2D1P54289 1103 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ADPRHP54922 357 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 POLE2P56282 527 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 COG7P83436 770 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TESK1Q15569 626 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CST6Q15828 149 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 HNRNPA1L2Q32P51 320 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ZSCAN23Q3MJ62 389 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TMEM119Q4V9L6 283 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 MPPE1Q53F39 396 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 HS1BP3Q53T59 392 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 C3orf38Q5JPI3 329 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 HP1BP3Q5SSJ5 553 aaPredicted RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PRAMEF14Q5SWL7 426 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 HIST2H2BCQ6DN03 193 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SPNS3Q6ZMD2 512 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 Q6ZS46 218 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PAQR9Q6ZVX9 377 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 RUFY3Q7L099 469 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TIPARPQ7Z3E1 657 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 AHI1Q8N157 1196 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 LRRN4CLQ8ND94 238 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 IFI44Q8TCB0 444 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SERAC1Q96JX3 654 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 MMTAG2Q9BU76 263 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 TMPRSS13Q9BYE2 586 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 B3GNT5Q9BYG0 378 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 ZNF518BQ9C0D4 1074 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 CCSER2Q9H7U1 834 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 AASDHPPTQ9NRN7 309 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 FBXL12Q9NXK8 326 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 AGO2Q9UKV8 859 aaKnown RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 NAP1L2Q9ULW6 460 aaPredicted RBP2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PHTF1Q9UMS5 762 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PLAAQ9Y263 795 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 PCDHA5Q9Y5H7 936 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 SNX9Q9Y5X1 595 aa2.2□□□□□ -2.06
NEDD1-204ENST00000457368 LAMA5O15230 3695 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 A0A1B0GTL3 188 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 A0A1W2PP55 124 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 HHLA1C9JL84 531 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 ANKRD63C9JTQ0 380 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 E9PMD0 336 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 PLRG1O43660 514 aaKnown RBP2.19□□□□□ -2.06
NEDD1-204ENST00000457368 AGFG2O95081 481 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 CTDNEP1O95476 244 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 CYBBP04839 570 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 ITGB3P05106 788 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 PRKCGP05129 697 aa2.19□□□□□ -2.06
NEDD1-204ENST00000457368 ATP5BP06576 529 aaKnown RBP2.19□□□□□ -2.06
NEDD1-204ENST00000457368 SRPRAP08240 638 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms