RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 APOBEC2Q9Y235 224 aaKnown RBP13.82□□□□□ -0.2
TOP3B-213ENST00000457179 A0A0G2JMZ2 1700 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 PLXNB2O15031 1838 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 E2F8A0AVK6 867 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 ARL5CA6NH57 179 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 CXorf49A8MYA2 514 aaPredicted RBP13.82□□□□□ -0.2
TOP3B-213ENST00000457179 BIRC5O15392 142 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 SLC10A3P09131 477 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 OR4Q2P0C623 313 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 USP17L7P0C7H9 530 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 TTC3P53804 2025 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 CDH15P55291 814 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 CRADDP78560 199 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 SREBF2Q12772 1141 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 KYAT1Q16773 422 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 SYPL2Q5VXT5 272 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 SLC7A5P1Q8MH63 180 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 SLC35F5Q8WV83 523 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 SLC17A6Q9P2U8 582 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 GTF2IRD1Q9UHL9 959 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 PLXNA1Q9UIW2 1896 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 DNAJC16Q9Y2G8 782 aa13.82□□□□□ -0.2
TOP3B-213ENST00000457179 CEP290O15078 2479 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 MATN2O00339 956 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 CASQ2O14958 399 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-213ENST00000457179 CA12O43570 354 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 ITGAXP20702 1163 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 APOFQ13790 326 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 NOMO1Q15155 1222 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 TBCCQ15814 346 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 VWA5B1Q5TIE3 1220 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 TMEM214Q6NUQ4 689 aaKnown RBP13.81□□□□□ -0.2
TOP3B-213ENST00000457179 FRMD7Q6ZUT3 714 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 CYP4V2Q6ZWL3 525 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-213ENST00000457179 CLVS1Q8IUQ0 354 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-213ENST00000457179 PLD5Q8N7P1 536 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 FNIP1Q8TF40 1166 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 RNF34Q969K3 372 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 ZNF560Q96MR9 790 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 PGLYRP2Q96PD5 576 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 RNF157Q96PX1 679 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 TBCBQ99426 244 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 HNRNPABQ99729 332 aaKnown RBP13.81□□□□□ -0.2
TOP3B-213ENST00000457179 DHRS4Q9BTZ2 278 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 EBF1Q9UH73 591 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 TMED5Q9Y3A6 229 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 SDR42E2A6NKP2 422 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 K7EPI3 171 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 M0QYT0 321 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 OXSR1O95747 527 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-213ENST00000457179 ITGB1P05556 798 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 F7P08709 466 aaPredicted RBP13.81□□□□□ -0.2
TOP3B-213ENST00000457179 AOC1P19801 751 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 PTPN7P35236 360 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 PBX3P40426 434 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 SULT1E1P49888 294 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 ADAM17P78536 824 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 ZBTB6Q15916 424 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 SDHAF4Q5VUM1 108 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 CASC4Q6P4E1 433 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 C16orf87Q6PH81 154 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 KBTBD6Q86V97 674 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 FBXW8Q8N3Y1 598 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 PCDH19Q8TAB3 1148 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 CD99L2Q8TCZ2 262 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 VPS50Q96JG6 964 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 XAB2Q9HCS7 855 aaKnown RBP13.81□□□□□ -0.2
TOP3B-213ENST00000457179 RAB26Q9ULW5 256 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 PSMD13Q9UNM6 376 aa13.81□□□□□ -0.2
TOP3B-213ENST00000457179 APOL1O14791 398 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 MGEA5O60502 916 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 SIN3BO75182 1162 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 FUCA1P04066 466 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 HOXD8P13378 290 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-213ENST00000457179 GOT1P17174 413 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 RPL10P27635 214 aaKnown RBP13.8□□□□□ -0.2
TOP3B-213ENST00000457179 TKTL1P51854 596 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 STX3Q13277 289 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 TAF2Q6P1X5 1199 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 TP53INP2Q8IXH6 220 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 UNC5BQ8IZJ1 945 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 MPP5Q8N3R9 675 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 RAET1EQ8TD07 263 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 ACTRT2Q8TDY3 377 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 KCNN1Q92952 543 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 SIK2Q9H0K1 926 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 PLK2Q9NYY3 685 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 PIRO00625 290 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 NCAM1P13591 858 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 PSMC3P17980 439 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 PTPN1P18031 435 aaKnown RBP13.8□□□□□ -0.2
TOP3B-213ENST00000457179 BDNFP23560 247 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 CDK9P50750 372 aaKnown RBP13.8□□□□□ -0.2
TOP3B-213ENST00000457179 BST2Q10589 180 aaKnown RBP13.8□□□□□ -0.2
TOP3B-213ENST00000457179 SV2CQ496J9 727 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 KIAA0319Q5VV43 1072 aa13.8□□□□□ -0.2
TOP3B-213ENST00000457179 TRMT10BQ6PF06 316 aaKnown RBP13.8□□□□□ -0.2
TOP3B-213ENST00000457179 WDR75Q8IWA0 830 aaKnown RBP13.8□□□□□ -0.2
TOP3B-213ENST00000457179 ANKRD52Q8NB46 1076 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms