RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PPP1R16AQ96I34 528 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 SNRNP25Q9BV90 132 aaKnown RBP23.65■■□□□ 1.38
CBX3-204ENST00000456948 TRIM7Q9C029 511 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 ZDHHC5Q9C0B5 715 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 KDM4CQ9H3R0 1056 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 NDFIP2Q9NV92 336 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 CTTNBP2NLQ9P2B4 639 aa23.65■■□□□ 1.38
CBX3-204ENST00000456948 K7ERQ8 282 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 BCAT2O15382 392 aaPredicted RBP23.64■■□□□ 1.37
CBX3-204ENST00000456948 BUB1O43683 1085 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 FSBPO95073 299 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 GLDCP23378 1020 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 MAOBP27338 520 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 ARL4AP40617 200 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 HCAR3P49019 387 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 NDST2P52849 883 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 ARF5P84085 180 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 TEAD4Q15561 434 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 KIAA0895LQ68EN5 471 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.64■■□□□ 1.37
CBX3-204ENST00000456948 PLPP6Q8IY26 295 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 UMODL1-AS1Q8N2C9 162 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 NIPA2Q8N8Q9 360 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 OR2A12Q8NGT7 310 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 C6orf106Q9H6K1 298 aaPredicted RBP23.64■■□□□ 1.37
CBX3-204ENST00000456948 GPATCH2LQ9NWQ4 482 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 IL36AQ9UHA7 158 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 EIF2B4Q9UI10 523 aaKnown RBP23.64■■□□□ 1.37
CBX3-204ENST00000456948 NEU3Q9UQ49 428 aa23.64■■□□□ 1.37
CBX3-204ENST00000456948 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.64■■□□□ 1.37
CBX3-204ENST00000456948 H3BRJ5 948 aa23.63■■□□□ 1.37
CBX3-204ENST00000456948 KPNA3O00505 521 aaPredicted RBP23.63■■□□□ 1.37
CBX3-204ENST00000456948 SMAD6O43541 496 aaKnown RBP23.63■■□□□ 1.37
CBX3-204ENST00000456948 SSR1P43307 286 aaKnown RBP23.63■■□□□ 1.37
CBX3-204ENST00000456948 SNRPD1P62314 119 aaKnown RBP23.63■■□□□ 1.37
CBX3-204ENST00000456948 CARD16Q5EG05 197 aa23.63■■□□□ 1.37
CBX3-204ENST00000456948 RFX8Q6ZV50 586 aa23.63■■□□□ 1.37
CBX3-204ENST00000456948 RYBPQ8N488 228 aaPredicted RBP23.63■■□□□ 1.37
CBX3-204ENST00000456948 ARFGAP1Q8N6T3 406 aa23.63■■□□□ 1.37
CBX3-204ENST00000456948 ZNF564Q8TBZ8 553 aaPredicted RBP23.63■■□□□ 1.37
CBX3-204ENST00000456948 SKA1Q96BD8 255 aa23.63■■□□□ 1.37
CBX3-204ENST00000456948 HEPHQ9BQS7 1158 aa23.63■■□□□ 1.37
CBX3-204ENST00000456948 NHEJ1Q9H9Q4 299 aaPredicted RBP23.63■■□□□ 1.37
CBX3-204ENST00000456948 TNRC6BQ9UPQ9 1833 aaKnown RBP23.63■■□□□ 1.37
CBX3-204ENST00000456948 NUMA1Q14980 2115 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3DA0A087WVF3 549 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3IA0A087WXS9 549 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3EA0A087X179 549 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3KA0A087X1G2 549 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 MED19A0JLT2 244 aaPredicted RBP23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3FA6NER0 549 aaPredicted RBP23.62■■□□□ 1.37
CBX3-204ENST00000456948 ARHGAP42A6NI28 874 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3LB9A6J9 549 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 RASA4BC9J798 803 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 RASA4O43374 803 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3HP0C7X1 549 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 ENGP17813 658 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 CD27P26842 260 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 RAD51Q06609 339 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 INO80DQ53TQ3 878 aaPredicted RBP23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3GQ6DHY5 549 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3CQ6IPX1 549 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 NCEH1Q6PIU2 408 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TBC1D3Q8IZP1 549 aaPredicted RBP23.62■■□□□ 1.37
CBX3-204ENST00000456948 AADATQ8N5Z0 425 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 LZTR1Q8N653 840 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TEKT4Q8WW24 435 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 BIRC7Q96CA5 298 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 LRIG1Q96JA1 1093 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 TNKS2Q9H2K2 1166 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 CAPN10Q9HC96 672 aa23.62■■□□□ 1.37
CBX3-204ENST00000456948 C4orf47A7E2U8 309 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 ARHGAP33O14559 1287 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 TMEM253P0C7T8 217 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 NUDT1P36639 197 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 AFF3P51826 1226 aaKnown RBP23.61■■□□□ 1.37
CBX3-204ENST00000456948 ASTE1Q2TB18 679 aaPredicted RBP23.61■■□□□ 1.37
CBX3-204ENST00000456948 IL27RAQ6UWB1 636 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 DPY19L3Q6ZPD9 716 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 ZCCHC9Q8N567 271 aaKnown RBP23.61■■□□□ 1.37
CBX3-204ENST00000456948 HSPH1Q92598 858 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 PEBP4Q96S96 227 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 KCTD15Q96SI1 283 aaPredicted RBP23.61■■□□□ 1.37
CBX3-204ENST00000456948 GTPBP2Q9BX10 602 aaKnown RBP23.61■■□□□ 1.37
CBX3-204ENST00000456948 OSGEPQ9NPF4 335 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 RXFP3Q9NSD7 469 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 HECAQ9UBI9 543 aaPredicted RBP23.61■■□□□ 1.37
CBX3-204ENST00000456948 SERGEFQ9UGK8 458 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 SARDHQ9UL12 918 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 FCF1Q9Y324 198 aaKnown RBP23.61■■□□□ 1.37
CBX3-204ENST00000456948 DNAH14Q0VDD8 3507 aa23.61■■□□□ 1.37
CBX3-204ENST00000456948 GSRP00390 522 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 MAPK8P45983 427 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 CCR5P51681 352 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 ADPRHP54922 357 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 TBX2Q13207 712 aaPredicted RBP23.6■■□□□ 1.37
CBX3-204ENST00000456948 SERINC3Q13530 473 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 DPYSL2Q16555 572 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 CA9Q16790 459 aa23.6■■□□□ 1.37
CBX3-204ENST00000456948 ARSIQ5FYB1 569 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms