RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	PSMB7	Q99436	277 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	MKRN2	Q9H000	416 aa	Known RBP	10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	POLM	Q9NP87	494 aa	Predicted RBP	10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	NDFIP2	Q9NV92	336 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	TMEM248	Q9NWD8	314 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	ERVW-1	Q9UQF0	538 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	GPR179	Q6PRD1	2367 aa		10.19	□□□□□ -0.78
CHEK2-221	ENST00000456369	ILVBL	A1L0T0	632 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	CCDC66	A2RUB6	948 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	DDX3Y	O15523	660 aa	Known RBP	10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	RNF8	O76064	485 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	ALDH1A2	O94788	518 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	SRPRA	P08240	638 aa	Known RBP	10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	RHOXF2B	P0C7M4	288 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	HLA-E	P13747	358 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	CXCR5	P32302	372 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	C2orf54	Q08AI8	447 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	CA9	Q16790	459 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	TMEM259	Q4ZIN3	620 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	C6orf118	Q5T5N4	469 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	ERMARD	Q5T6L9	678 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	RNF219	Q5W0B1	726 aa	Predicted RBP	10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	C8orf74	Q6P047	294 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZNF783	Q6ZMS7	281 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	ASCL5	Q7RTU5	278 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	FRS2	Q8WU20	508 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	HMGB4	Q8WW32	186 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	NKD2	Q969F2	451 aa	Predicted RBP	10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	TBC1D31	Q96DN5	1066 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	FAM122A	Q96E09	287 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	NCAPG	Q9BPX3	1015 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	RHOXF2	Q9BQY4	288 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	SNRNP25	Q9BV90	132 aa	Known RBP	10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	TPSD1	Q9BZJ3	242 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	NOL6	Q9H6R4	1146 aa	Known RBP	10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	GPATCH2L	Q9NWQ4	482 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	PCSK1N	Q9UHG2	260 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	IP6K2	Q9UHH9	426 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	SLCO3A1	Q9UIG8	710 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	ANAPC7	Q9UJX3	599 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	USP18	Q9UMW8	372 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	AP4E1	Q9UPM8	1137 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	ALG6	Q9Y672	507 aa		10.18	□□□□□ -0.78
CHEK2-221	ENST00000456369	MUC22	E2RYF6	1773 aa	Predicted RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	PRR23A	A6NEV1	266 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	WASH4P	A8MWX3	477 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	MYO1F	O00160	1098 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	CEP104	O60308	925 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	SYNCRIP	O60506	623 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	RPP40	O75818	363 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZMPSTE24	O75844	475 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	EPHX1	P07099	455 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	RHOC	P08134	193 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	DES	P17661	470 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	EPHB2	P29323	1055 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	MAN1A1	P33908	653 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	HTR7	P34969	479 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	CTNNA1	P35221	906 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	P2RY2	P41231	377 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	MAPKAPK2	P49137	400 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	NUMB	P49757	651 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	STK19	P49842	368 aa	Predicted RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	SLC25A11	Q02978	314 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	GNA12	Q03113	381 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	SULT2A1	Q06520	285 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	MAP7D1	Q3KQU3	841 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	FNDC3B	Q53EP0	1204 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	C9orf64	Q5T6V5	341 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	TXNRD3NB	Q6F5E7	133 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	RWDD4	Q6NW29	188 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	CPNE8	Q86YQ8	564 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	FRMD1	Q8N878	549 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZNF366	Q8N895	744 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	RTL3	Q8N8U3	475 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	EIF1AD	Q8N9N8	165 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	DCAF4L2	Q8NA75	395 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	ERLEC1	Q96DZ1	483 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	ZC3H10	Q96K80	434 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	RPL10L	Q96L21	214 aa	Known RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	ACE2	Q9BYF1	805 aa	Predicted RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	SLC6A17	Q9H1V8	727 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	MTG2	Q9H4K7	406 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	PRSS16	Q9NQE7	514 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	MAP10	Q9P2G4	905 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	VPS51	Q9UID3	782 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	VPS28	Q9UK41	221 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	HS3ST2	Q9Y278	367 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	PIEZO1	Q92508	2521 aa		10.17	□□□□□ -0.78
CHEK2-221	ENST00000456369	GOLGA6L10	A0A0M3HER8	536 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	CXorf51A	A0A1B0GTR3	108 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	TTC34	A8MYJ7	566 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	DCLK1	O15075	740 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	ATP9B	O43861	1147 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	CREB3	O43889	395 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	PRPSAP2	O60256	369 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	SNAP91	O60641	907 aa		10.16	□□□□□ -0.78
CHEK2-221	ENST00000456369	PROSC	O94903	275 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms