RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 SLC13A5Q86YT5 568 aaPredicted RBP14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 C1orf210Q8IVY1 113 aa14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 TP53INP2Q8IXH6 220 aa14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 CCDC13Q8IYE1 715 aa14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 PSKH2Q96QS6 385 aa14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 NAP1L3Q99457 506 aaPredicted RBP14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 NAPGQ99747 312 aaPredicted RBP14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 PRRX2Q99811 253 aa14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 CD248Q9HCU0 757 aa14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 SEPT3Q9UH03 358 aa14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 FBXO4Q9UKT5 387 aa14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 SNX12Q9UMY4 172 aa14.57□□□□□ -0.08
HMGXB4-204ENST00000455359 CCDC163A0A0D9SF12 145 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 CTAGE9A4FU28 777 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 TTC34A8MYJ7 566 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 WASH3PC4AMC7 463 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 KIF2AO00139 706 aaPredicted RBP14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 LAMTOR5O43504 91 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 TMCC1O94876 653 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 APBB3O95704 486 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 GSRP00390 522 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 ATP1A1P05023 1023 aaKnown RBP14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 RECQLP46063 649 aaPredicted RBP14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 CSNK1DP48730 415 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 ZBTB16Q05516 673 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 NSUN2Q08J23 767 aaKnown RBP eCLIP14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 NOMO1Q15155 1222 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 ACCSLQ4AC99 568 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 CARD16Q5EG05 197 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 RALGPS1Q5JS13 557 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 MARC1Q5VT66 337 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 ARHGAP36Q6ZRI8 547 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 NYAP1Q6ZVC0 841 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 DSG4Q86SJ6 1040 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 TEX26Q8N6G2 289 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 CCNYQ8ND76 341 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 TSTD1Q8NFU3 115 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 OR2T3Q8NH03 318 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 TFB1MQ8WVM0 346 aaKnown RBP14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 MAML1Q92585 1016 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 PTPRN2Q92932 1015 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 HAUS1Q96CS2 278 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 LRIG1Q96JA1 1093 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 WDR24Q96S15 920 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 FERMT1Q9BQL6 677 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 HERPUD2Q9BSE4 406 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 FAM126AQ9BYI3 521 aaPredicted RBP14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 PRSS16Q9NQE7 514 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 HOMER3Q9NSC5 361 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 EBF1Q9UH73 591 aa14.56□□□□□ -0.08
HMGXB4-204ENST00000455359 DOCK4Q8N1I0 1966 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 KIAA1549LQ6ZVL6 1849 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 ANTXRLA6NF34 631 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 K7ERQ8 282 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 MCF2LO15068 1137 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 SMAD6O43541 496 aaKnown RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 CEP104O60308 925 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 RNASEH1O60930 286 aaKnown RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 PECAM1P16284 738 aaPredicted RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 CES1P23141 567 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 MAPK8P45983 427 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 SNRPD1P62314 119 aaKnown RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 IFI35P80217 286 aaPredicted RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 SFSWAPQ12872 951 aaKnown RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 LBRQ14739 615 aaKnown RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 PRKD1Q15139 912 aaPredicted RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 LLGL1Q15334 1064 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 CYTH1Q15438 398 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 AADACL2Q6P093 401 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 NPNTQ6UXI9 565 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 RASGEF1CQ8N431 466 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 OR2AP1Q8NGE2 309 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 ACTL9Q8TC94 416 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 OR8D1Q8WZ84 308 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 GDAP1L1Q96MZ0 367 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 OSBPL9Q96SU4 736 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 VAT1Q99536 393 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 LRFN3Q9BTN0 628 aa14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 CINPQ9BW66 212 aaPredicted RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 RSPH9Q9H1X1 276 aaPredicted RBP14.55□□□□□ -0.08
HMGXB4-204ENST00000455359 GALR2O43603 387 aaPredicted RBP14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 SIN3BO75182 1162 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 ZNF821O75541 412 aaPredicted RBP14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 POP4O95707 220 aaKnown RBP14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 IGSF6O95976 241 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 FGGP02679 453 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 HLA-EP13747 358 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 CCNB1P14635 433 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 WASP42768 502 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 MMP13P45452 471 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 NRLP54845 237 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 RHOAP61586 193 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 OTUD4Q01804 1114 aaKnown RBP14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 SATB1Q01826 763 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 RAD51Q06609 339 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 ZNF235Q14590 738 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 GRM3Q14832 879 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 ZNF528Q3MIS6 628 aa14.54□□□□□ -0.08
HMGXB4-204ENST00000455359 SLC45A4Q5BKX6 768 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms