RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 NUDT18Q6ZVK8 323 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 JAMLQ86YT9 394 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 SFTPA1Q8IWL2 248 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 ZNF567Q8N184 647 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 SH2D3CQ8N5H7 860 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 CNTD1Q8N815 330 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 CCDC89Q8N998 374 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 KDM1BQ8NB78 822 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 MYO19Q96H55 970 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 TEKT5Q96M29 485 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 PSKH2Q96QS6 385 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 RBM22Q9NW64 420 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 WNT16Q9UBV4 365 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 SEPT3Q9UH03 358 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 TRHDEQ9UKU6 1024 aa16.89■□□□□ 0.29
CCDC90B-202ENST00000455220 MYO18AQ92614 2054 aaKnown RBP16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 FAM187AA6NFU0 413 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 TTI1O43156 1089 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 TMCC1O94876 653 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 SRCP12931 536 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 DRD1P21728 446 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 TNFRSF4P43489 277 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 MMP13P45452 471 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 STK19P49842 368 aaPredicted RBP16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 PTK6Q13882 451 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 PON2Q15165 354 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 CYTH1Q15438 398 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 GLE1Q53GS7 698 aaKnown RBP16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 ANKRD20A2Q5SQ80 823 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 ANKRD20A1Q5TYW2 823 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 ANKRD20A3Q5VUR7 823 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 C8orf74Q6P047 294 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 TPRG1Q6ZUI0 275 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 UBALD2Q8IYN6 164 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 CCDC110Q8TBZ0 833 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 USP33Q8TEY7 942 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 CYB5D2Q8WUJ1 264 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 SORCS1Q8WY21 1168 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 EZH1Q92800 747 aaPredicted RBP16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 RPL10LQ96L21 214 aaKnown RBP16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 CEP41Q9BYV8 373 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 CD320Q9NPF0 282 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 HCN2Q9UL51 889 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 ATP8A1Q9Y2Q0 1164 aa16.88■□□□□ 0.29
CCDC90B-202ENST00000455220 TRIOO75962 3097 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 K7EQS6 105 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 K7ERQ8 282 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 MAN2B1O00754 1011 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 SMAD6O43541 496 aaKnown RBP16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 ATP9BO43861 1147 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 KRT14P02533 472 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 HLA-DQB2P05538 268 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 ZSCAN5DPP0CG00 497 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 CHRM1P11229 460 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 ETS1P14921 441 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 CD68P34810 354 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 PRKCQQ04759 706 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 ZNF235Q14590 738 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 ALG1LQ6GMV1 187 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 FSTL4Q6MZW2 842 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 PRUNE1Q86TP1 453 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 BBS5Q8N3I7 341 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 PGBD5Q8N414 524 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 ATP11CQ8NB49 1132 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 CCHCR1Q8TD31 782 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 UCMAQ8WVF2 138 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 FAM3CQ92520 227 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 ISG20Q96AZ6 181 aaKnown RBP16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 MGME1Q9BQP7 344 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 LRRC1Q9BTT6 524 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 CINPQ9BW66 212 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 CEP44Q9C0F1 390 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 ARHGEF3Q9NR81 526 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 PAK5Q9P286 719 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 KLHL8Q9P2G9 620 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 CUL9Q8IWT3 2517 aa16.87■□□□□ 0.29
CCDC90B-202ENST00000455220 EFCAB8A8MWE9 144 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 MUSKO15146 869 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 ZBTB24O43167 697 aaPredicted RBP16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 ZNF821O75541 412 aaPredicted RBP16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 RPL22P35268 128 aaKnown RBP16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 ACTN2P35609 894 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 HSPA9P38646 679 aaKnown RBP16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 GRSF1Q12849 480 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 PPP1R7Q15435 360 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 TJAP1Q5JTD0 557 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 FAM182AQ5T1J6 154 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 C4orf22Q6V702 233 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 PID1Q7Z2X4 250 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 TSEN2Q8NCE0 465 aaKnown RBP16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 AGAP3Q96P47 875 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 NT5MQ9NPB1 228 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 THAP10Q9P2Z0 257 aaPredicted RBP16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 LHX3Q9UBR4 397 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 SLCO3A1Q9UIG8 710 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 FCF1Q9Y324 198 aaKnown RBP16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 NCOR1O75376 2440 aa16.86■□□□□ 0.29
CCDC90B-202ENST00000455220 EGFP01133 1207 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 CR2P20023 1033 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms