RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CEP290O15078 2479 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 TYW5A2RUC4 315 aaKnown RBP14.5□□□□□ -0.09
USP39-207ENST00000450066 KDELR3O43731 214 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 SHOX2O60902 331 aaPredicted RBP14.5□□□□□ -0.09
USP39-207ENST00000450066 RHOP08100 348 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 HOXD9P28356 352 aaPredicted RBP14.5□□□□□ -0.09
USP39-207ENST00000450066 ETFBP38117 255 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 MSH2P43246 934 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 MPP3Q13368 585 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 TMED2Q15363 201 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 IL31Q6EBC2 164 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 CXorf57Q6NSI4 855 aaKnown RBP14.5□□□□□ -0.09
USP39-207ENST00000450066 PRPF39Q86UA1 669 aaKnown RBP14.5□□□□□ -0.09
USP39-207ENST00000450066 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.5□□□□□ -0.09
USP39-207ENST00000450066 TMA16Q96EY4 203 aaKnown RBP14.5□□□□□ -0.09
USP39-207ENST00000450066 TRIM56Q9BRZ2 755 aaKnown RBP14.5□□□□□ -0.09
USP39-207ENST00000450066 MOCS1Q9NZB8 636 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 SAMD15Q9P1V8 674 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 SH3BP1Q9Y3L3 701 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 MAGEB16A2A368 324 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 PER2O15055 1255 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 ALDH1A2O94788 518 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 POLBP06746 335 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 POU2F2P09086 479 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 ADRA1AP35348 466 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 ARHGAP15Q53QZ3 475 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 GPR158Q5T848 1215 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 ELMSAN1Q6PJG2 1045 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 LRRC6Q86X45 466 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 CPXM2Q8N436 756 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 OR7D4Q8NG98 312 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 DCAKDQ8WVC6 231 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 SLC44A1Q8WWI5 657 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 TBL1YQ9BQ87 522 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 ACE2Q9BYF1 805 aaPredicted RBP14.5□□□□□ -0.09
USP39-207ENST00000450066 IL22Q9GZX6 179 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 VPS45Q9NRW7 570 aa14.5□□□□□ -0.09
USP39-207ENST00000450066 GBF1Q92538 1859 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 CDH23Q9H251 3354 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 LEFTY2O00292 366 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 SCAMP3O14828 347 aaKnown RBP14.49□□□□□ -0.09
USP39-207ENST00000450066 TBL1XO60907 577 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 MOSPD3O75425 235 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 PIAS1O75925 651 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 AVPR1AP37288 418 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 OXCT1P55809 520 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 CMTM8Q8IZV2 173 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 IPMKQ8NFU5 416 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 TTC17Q96AE7 1141 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 MRRFQ96E11 262 aaKnown RBP14.49□□□□□ -0.09
USP39-207ENST00000450066 TCEAL4Q96EI5 215 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 APOL2Q9BQE5 337 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 SPON2Q9BUD6 331 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 TASP1Q9H6P5 420 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 HAUS2Q9NVX0 235 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 HCFC2Q9Y5Z7 792 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 IKBKGQ9Y6K9 419 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 MYO7AQ13402 2215 aa14.49□□□□□ -0.09
USP39-207ENST00000450066 FAM159BA6NKW6 160 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 H0Y626 953 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 PBX2P40425 430 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 MDH1P40925 334 aaKnown RBP14.48□□□□□ -0.09
USP39-207ENST00000450066 ITKQ08881 620 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 RFTN1Q14699 578 aaPredicted RBP14.48□□□□□ -0.09
USP39-207ENST00000450066 CRYMQ14894 314 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 TEAD2Q15562 447 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 MPP7Q5T2T1 576 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 RANBP10Q6VN20 620 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 TMEM135Q86UB9 458 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 TRABD2AQ86V40 505 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 SLC26A11Q86WA9 606 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 BBS7Q8IWZ6 715 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 PGBD5Q8N414 524 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 MRGPRX2Q96LB1 330 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 FSD1LQ9BXM9 530 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 PRKD2Q9BZL6 878 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 POLR1EQ9GZS1 481 aaKnown RBP14.48□□□□□ -0.09
USP39-207ENST00000450066 ATP13A1Q9HD20 1204 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 SENP1Q9P0U3 644 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 E2F8A0AVK6 867 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 PMPCBO75439 489 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 LUC7L3O95232 432 aaKnown RBP14.48□□□□□ -0.09
USP39-207ENST00000450066 MMP2P08253 660 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 INHBAP08476 426 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 KRT15P19012 456 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 WNT3AP56704 352 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 MAXP61244 160 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 GUCY1A3Q02108 690 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 NIPAL4Q0D2K0 466 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 ZNF235Q14590 738 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 SLC5A9Q2M3M2 681 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 SPANXN3Q5MJ09 141 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 CERCAMQ5T4B2 595 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 RNF219Q5W0B1 726 aaPredicted RBP14.48□□□□□ -0.09
USP39-207ENST00000450066 DENND5AQ6IQ26 1287 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 ZNF449Q6P9G9 518 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 TRMT10BQ6PF06 316 aaKnown RBP14.48□□□□□ -0.09
USP39-207ENST00000450066 KDELC1Q6UW63 502 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 LEKR1Q6ZMV7 388 aa14.48□□□□□ -0.09
USP39-207ENST00000450066 RBM23Q86U06 439 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms