RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CABLES1Q8TDN4 633 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 PHF10Q8WUB8 498 aaKnown RBP10.9□□□□□ -0.66
LINC00342-202ENST00000448494 TOP1MTQ969P6 601 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 ADI1Q9BV57 179 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 ANKHQ9HCJ1 492 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 PLSCR3Q9NRY6 295 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 B3GNT2Q9NY97 397 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 TMEM216Q9P0N5 145 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 SHOC2Q9UQ13 582 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 PLLPQ9Y342 182 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 BOLA1Q9Y3E2 137 aa10.9□□□□□ -0.66
LINC00342-202ENST00000448494 ZNF98A6NK75 572 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 DNAJB5O75953 348 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 IL18RAPO95256 599 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 HTR7P34969 479 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 GRK3P35626 688 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ZNF76P36508 570 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ADCY7P51828 1080 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 CASP7P55210 303 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 NLRP11P59045 1033 aaKnown RBP10.89□□□□□ -0.67
LINC00342-202ENST00000448494 MS4A2Q01362 244 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 AQP6Q13520 282 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SLC36A3Q495N2 470 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 TEDDM1Q5T9Z0 273 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 GRTP1Q5TC63 336 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 LETMD1Q6P1Q0 360 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 CRTC3Q6UUV7 619 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 PLEKHM3Q6ZWE6 761 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 BRINP3Q76B58 766 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 VN1R5Q7Z5H4 357 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 HID1Q8IV36 788 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 KYQ8NBH2 561 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 BPIFB6Q8NFQ5 453 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 VANGL1Q8TAA9 524 aaPredicted RBP10.89□□□□□ -0.67
LINC00342-202ENST00000448494 APBB2Q92870 758 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SNAPC3Q92966 411 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 MCRS1Q96EZ8 462 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ST6GAL2Q96JF0 529 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SERAC1Q96JX3 654 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 DACH2Q96NX9 599 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 PITHD1Q9GZP4 211 aaPredicted RBP10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SLC6A17Q9H1V8 727 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 KCTD10Q9H3F6 313 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ZNF556Q9HAH1 456 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 NTN4Q9HB63 628 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SIRT5Q9NXA8 310 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 GCNT4Q9P109 453 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ENOPH1Q9UHY7 261 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 STOML2Q9UJZ1 356 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 BAG5Q9UL15 447 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 DGKBQ9Y6T7 804 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 CLUHO75153 1309 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 TNKSO95271 1327 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 LOC100653049A0A140TA62 436 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SAC3D1A6NKF1 404 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 PRSS44E7EML9 344 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 M0R2N6 131 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ZNF780AO75290 641 aaPredicted RBP10.89□□□□□ -0.67
LINC00342-202ENST00000448494 KRT34O76011 436 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 FTLP02792 175 aaPredicted RBP10.89□□□□□ -0.67
LINC00342-202ENST00000448494 BMP2P12643 396 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ITGA2P17301 1181 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ATF3P18847 181 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ALAS2P22557 587 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 UQCRC1P31930 480 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 GRIA1P42261 906 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 CABP4P57796 275 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 MERTKQ12866 999 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 GRB10Q13322 594 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SCARF1Q14162 830 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 PAGE2BQ5JRK9 111 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 INTS11Q5TA45 600 aaKnown RBP10.89□□□□□ -0.67
LINC00342-202ENST00000448494 CES4AQ5XG92 561 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 XKRXQ6PP77 449 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 LIMS2Q7Z4I7 341 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 MRPL10Q7Z7H8 261 aaKnown RBP10.89□□□□□ -0.67
LINC00342-202ENST00000448494 NOXA1Q86UR1 476 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 LRRTM3Q86VH5 581 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 UBQLNLQ8IYU4 475 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 EID3Q8N140 333 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 CPA6Q8N4T0 437 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ENKURQ8TC29 256 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 LPGAT1Q92604 370 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 RAD54LQ92698 747 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SLC5A5Q92911 643 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 FKBP10Q96AY3 582 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SGK3Q96BR1 496 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 TBCBQ99426 244 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 SEMA6AQ9H2E6 1030 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 ARMT1Q9H993 441 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 EFCAB1Q9HAE3 211 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 CPNE7Q9UBL6 633 aa10.89□□□□□ -0.67
LINC00342-202ENST00000448494 FAM205AQ6ZU69 1335 aa10.88□□□□□ -0.67
LINC00342-202ENST00000448494 ZNFX1Q9P2E3 1918 aaKnown RBP10.88□□□□□ -0.67
LINC00342-202ENST00000448494 LRRC72A6NJI9 287 aa10.88□□□□□ -0.67
LINC00342-202ENST00000448494 GNAO1P09471 354 aa10.88□□□□□ -0.67
LINC00342-202ENST00000448494 PSKH1P11801 424 aa10.88□□□□□ -0.67
LINC00342-202ENST00000448494 PCSK2P16519 638 aa10.88□□□□□ -0.67
LINC00342-202ENST00000448494 MMP8P22894 467 aa10.88□□□□□ -0.67
LINC00342-202ENST00000448494 PRIM2P49643 509 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms